RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NBPF7P0C2Y1 421 aaPredicted RBP10.93□□□□□ -0.66
UFD1-205ENST00000459854 NFIXQ14938 502 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 EYA3Q99504 573 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 PHACTR2O75167 634 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 IL15P40933 162 aaPredicted RBP10.93□□□□□ -0.66
UFD1-205ENST00000459854 CTSWP56202 376 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 RRAGBQ5VZM2 374 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 CALCOCO2Q13137 446 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
UFD1-205ENST00000459854 SPAG5Q96R06 1193 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 IFNKQ9P0W0 207 aa10.93□□□□□ -0.66
UFD1-205ENST00000459854 PUF60Q9UHX1 559 aaKnown RBP10.93□□□□□ -0.66
UFD1-205ENST00000459854 RGPD2P0DJD1 1756 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 VWA3BQ502W6 1294 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 CYP26C1Q6V0L0 522 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 CATIPQ7Z7H3 387 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 CCDC51Q96ER9 411 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 BICC1Q9H694 974 aaKnown RBP10.92□□□□□ -0.66
UFD1-205ENST00000459854 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 NRAPQ86VF7 1730 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 IBTKQ9P2D0 1353 aaPredicted RBP10.92□□□□□ -0.66
UFD1-205ENST00000459854 VGLL3A8MV65 326 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 ITGA6P23229 1130 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 SUSD4Q5VX71 490 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 TMTC1Q8IUR5 882 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 SUPT20HQ8NEM7 779 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 TBC1D31Q96DN5 1066 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 ISCA1Q9BUE6 129 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 SPTLC2O15270 562 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 ZNF76P36508 570 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 NLRP5P59047 1200 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 FAM160A1Q05DH4 1040 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 SNCBQ16143 134 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 SLC4A9Q96Q91 983 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 NUP58Q9BVL2 599 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 MRC1P22897 1456 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 DNA2P51530 1060 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 RPUSD2Q8IZ73 545 aaKnown RBP10.92□□□□□ -0.66
UFD1-205ENST00000459854 NAPBQ9H115 298 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 CLSTN2Q9H4D0 955 aa10.92□□□□□ -0.66
UFD1-205ENST00000459854 LRRD1A4D1F6 860 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 HIP1RO75146 1068 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 PDIA6Q15084 440 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 C8orf74Q6P047 294 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 ANKRD44Q8N8A2 993 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 ARMC9Q7Z3E5 817 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 VIMP08670 466 aaKnown RBP10.91□□□□□ -0.66
UFD1-205ENST00000459854 NPR1P16066 1061 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 SDSP20132 328 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
UFD1-205ENST00000459854 DNM1Q05193 864 aaKnown RBP10.91□□□□□ -0.66
UFD1-205ENST00000459854 BRIP1Q9BX63 1249 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 CSRNP2Q9H175 543 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 Q9H521 79 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 LRRC37A3O60309 1634 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
UFD1-205ENST00000459854 METAP2P50579 478 aaKnown RBP eCLIP10.91□□□□□ -0.66
UFD1-205ENST00000459854 RPS8P62241 208 aaKnown RBP10.91□□□□□ -0.66
UFD1-205ENST00000459854 MICAL1Q8TDZ2 1067 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 SUCLG2Q96I99 432 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 CARD6Q9BX69 1037 aa10.91□□□□□ -0.66
UFD1-205ENST00000459854 SMARCA5O60264 1052 aaPredicted RBP10.9□□□□□ -0.66
UFD1-205ENST00000459854 GYS1P13807 737 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 ZNF34Q8IZ26 560 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 TRIM4Q9C037 500 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 USP44Q9H0E7 712 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 NSFL1CQ9UNZ2 370 aaKnown RBP10.9□□□□□ -0.66
UFD1-205ENST00000459854 PRC1O43663 620 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 STMN1P16949 149 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 PPP2R5EQ16537 467 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 DBN1Q16643 649 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 FCHSD1Q86WN1 690 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 RAB3IL1Q8TBN0 382 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 FAM114A2Q9NRY5 505 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 GUCA1BQ9UMX6 200 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 ATP10DQ9P241 1426 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 BBOX1O75936 387 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 MAP3K12Q12852 859 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 ZNF827Q17R98 1081 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 CCDC122Q5T0U0 273 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 CCDC62Q6P9F0 684 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 MASTLQ96GX5 879 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 ZC3H12CQ9C0D7 883 aaKnown RBP10.9□□□□□ -0.66
UFD1-205ENST00000459854 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 CAPN7Q9Y6W3 813 aa10.9□□□□□ -0.66
UFD1-205ENST00000459854 CDHR2Q9BYE9 1310 aa10.9□□□□□ -0.67
UFD1-205ENST00000459854 PKD1L3Q7Z443 1732 aa10.9□□□□□ -0.67
UFD1-205ENST00000459854 SMARCC2Q8TAQ2 1214 aa10.9□□□□□ -0.67
UFD1-205ENST00000459854 EXOC4Q96A65 974 aa10.9□□□□□ -0.67
UFD1-205ENST00000459854 MCUR1Q96AQ8 359 aa10.9□□□□□ -0.67
UFD1-205ENST00000459854 BCS1LQ9Y276 419 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms