RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 ZKSCAN5Q9Y2L8 839 aa17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 CICQ96RK0 1608 aaPredicted RBP17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 VWA3AA6NCI4 1184 aa17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 ADAMTS3O15072 1205 aa17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 TROAPQ12815 778 aa17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
GTF2IRD1-203ENST00000455841 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
GTF2IRD1-203ENST00000455841 C12orf60Q5U649 245 aa17.53■□□□□ 0.4
GTF2IRD1-203ENST00000455841 BRMS1Q9HCU9 246 aa17.53■□□□□ 0.4
GTF2IRD1-203ENST00000455841 WNT7AO00755 349 aa17.53■□□□□ 0.4
GTF2IRD1-203ENST00000455841 GPCPD1Q9NPB8 672 aa17.53■□□□□ 0.4
GTF2IRD1-203ENST00000455841 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
GTF2IRD1-203ENST00000455841 KRT2P35908 639 aa17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 LONRF3Q496Y0 759 aa17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 ANO10Q9NW15 660 aa17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 KCNH3Q9ULD8 1083 aa17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 TOB1P50616 345 aaPredicted RBP17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 DHX8Q14562 1220 aaKnown RBP17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 FBXL16Q8N461 479 aa17.52■□□□□ 0.4
GTF2IRD1-203ENST00000455841 ARID5BQ14865 1188 aa17.52■□□□□ 0.39
GTF2IRD1-203ENST00000455841 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.39
GTF2IRD1-203ENST00000455841 C4BP0C0L5 1744 aa17.52■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CDK8P49336 464 aa17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 UVSSAQ2YD98 709 aa17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 AXDND1Q5T1B0 1012 aaPredicted RBP17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 KRI1Q8N9T8 703 aaKnown RBP17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 ENGASEQ8NFI3 743 aa17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 EPSTI1Q96J88 318 aa17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TMTC3Q6ZXV5 915 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SERTAD1Q9UHV2 236 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SRGNP10124 158 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TRMT44Q8IYL2 757 aaKnown RBP17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TNRC6CQ9HCJ0 1690 aaKnown RBP17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CERS5Q8N5B7 392 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CSRNP2Q9H175 543 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 FAM13BQ9NYF5 915 aa17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
GTF2IRD1-203ENST00000455841 FLT1P17948 1338 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 H0YIN7 160 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 C21orf2O43822 256 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PKN1Q16512 942 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CCDC96Q2M329 555 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 ZNF772Q68DY9 489 aaPredicted RBP17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 KIF5BP33176 963 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 NFIAQ12857 509 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 IKQ13123 557 aaPredicted RBP17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 AOC3Q16853 763 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SHROOM1Q2M3G4 852 aaPredicted RBP17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CEP95Q96GE4 821 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CTAGE5O15320 804 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 STX17P56962 302 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 RCSD1Q6JBY9 416 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.49■□□□□ 0.39
GTF2IRD1-203ENST00000455841 LRP5O75197 1615 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 KLRF2D3W0D1 207 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SCG2P13521 617 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CMA1P23946 247 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PYCARDQ9ULZ3 195 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SLC16A2P36021 539 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 ZNF592Q92610 1267 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 ATP6V0A2Q9Y487 856 aa17.48■□□□□ 0.39
GTF2IRD1-203ENST00000455841 RASA1P20936 1047 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.395e-8■■■■■ 34.6
GTF2IRD1-203ENST00000455841 PTPAQ15257 358 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CCDC194A0A1B0GVG4 234 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 NPR1P16066 1061 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 NAPAP54920 295 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PTGDRQ13258 359 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 SMYD4Q8IYR2 804 aaPredicted RBP17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 NAT10Q9H0A0 1025 aaKnown RBP17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 MAPK8IP1Q9UQF2 711 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PCDHA5Q9Y5H7 936 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PRR29P0C7W0 189 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CALM1P0DP23 149 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CALM2P0DP24 149 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 CALM3P0DP25 149 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 PDE6BP35913 854 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 INF2Q27J81 1249 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 TTC38Q5R3I4 469 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 JAKMIP3Q5VZ66 844 aa17.47■□□□□ 0.39
GTF2IRD1-203ENST00000455841 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms