RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 FSTL1Q12841 308 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 TOB2Q14106 344 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-206ENST00000454852 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-206ENST00000454852 Q6ZUG5 572 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 ENAHQ8N8S7 591 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-206ENST00000454852 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 WRNIP1Q96S55 665 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
TRAF4-206ENST00000454852 NID2Q14112 1375 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 ERICH2A1L162 156 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 IFIT3O14879 490 aaKnown RBP13.22□□□□□ -0.29
TRAF4-206ENST00000454852 GDF11O95390 407 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 TTLL1O95922 423 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 GH2P01242 217 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 INPP5BP32019 993 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 AK2P54819 239 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 ARMC9Q7Z3E5 817 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 SIAH1Q8IUQ4 282 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
TRAF4-206ENST00000454852 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 NMT2O60551 498 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
TRAF4-206ENST00000454852 WTAPQ15007 396 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 SEPT2Q15019 361 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-206ENST00000454852 TCEANC2Q96MN5 208 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 WDR18Q9BV38 432 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-206ENST00000454852 SNCAIPQ9Y6H5 919 aa13.21□□□□□ -0.29
TRAF4-206ENST00000454852 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
TRAF4-206ENST00000454852 PTPRAP18433 802 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 ICA1Q05084 483 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 VGLL4Q14135 290 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 SHROOM1Q2M3G4 852 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-206ENST00000454852 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
TRAF4-206ENST00000454852 CST9Q5W186 159 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 BRF1Q92994 677 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 TMEM47Q9BQJ4 181 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 ZKSCAN3Q9BRR0 538 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 LRRC2Q9BYS8 371 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
TRAF4-206ENST00000454852 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
TRAF4-206ENST00000454852 DDAH1O94760 285 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 CD2BP2O95400 341 aaKnown RBP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 PPATQ06203 517 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 TROAPQ12815 778 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 PPP2R5BQ15173 497 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 SENP2Q9HC62 589 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 PICK1Q9NRD5 415 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 FZD1Q9UP38 647 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 RBM19Q9Y4C8 960 aaKnown RBP13.19□□□□□ -0.3
TRAF4-206ENST00000454852 CSADQ9Y600 493 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 MYH4Q9Y623 1939 aa13.19□□□□□ -0.3
TRAF4-206ENST00000454852 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 CALM1P0DP23 149 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 CALM2P0DP24 149 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 CALM3P0DP25 149 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 FGD1P98174 961 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 SH2B1Q9NRF2 756 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-206ENST00000454852 BRPF3Q9ULD4 1205 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
TRAF4-206ENST00000454852 A0A1W2PRG0 241 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 PFKFB2O60825 505 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
TRAF4-206ENST00000454852 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 TTLL12Q14166 644 aaPredicted RBP13.17□□□□□ -0.3
TRAF4-206ENST00000454852 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 CATIPQ7Z7H3 387 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 HHIPL1Q96JK4 782 aa13.17□□□□□ -0.3
TRAF4-206ENST00000454852 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms