RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
PDCD2-204ENST00000453163 XBP1P17861 261 aa23.26■■□□□ 1.31
PDCD2-204ENST00000453163 GTF2F1P35269 517 aaKnown RBP eCLIP23.26■■□□□ 1.31
PDCD2-204ENST00000453163 USP5P45974 858 aa23.26■■□□□ 1.31
PDCD2-204ENST00000453163 LONRF3Q496Y0 759 aa23.26■■□□□ 1.31
PDCD2-204ENST00000453163 BPIFA3Q9BQP9 254 aa23.26■■□□□ 1.31
PDCD2-204ENST00000453163 PHF20Q9BVI0 1012 aa23.26■■□□□ 1.31
PDCD2-204ENST00000453163 UFL1O94874 794 aa23.25■■□□□ 1.31
PDCD2-204ENST00000453163 ST5P78524 1137 aa23.25■■□□□ 1.31
PDCD2-204ENST00000453163 PTPREP23469 700 aa23.25■■□□□ 1.31
PDCD2-204ENST00000453163 EARS2Q5JPH6 523 aaKnown RBP23.25■■□□□ 1.31
PDCD2-204ENST00000453163 METTL16Q86W50 562 aaKnown RBP23.25■■□□□ 1.31
PDCD2-204ENST00000453163 SMAP1Q8IYB5 467 aaPredicted RBP23.25■■□□□ 1.31
PDCD2-204ENST00000453163 CTCFLQ8NI51 663 aaPredicted RBP23.25■■□□□ 1.31
PDCD2-204ENST00000453163 TUBE1Q9UJT0 475 aa23.25■■□□□ 1.31
PDCD2-204ENST00000453163 CDK5RAP2Q96SN8 1893 aa23.24■■□□□ 1.31
PDCD2-204ENST00000453163 SRBD1Q8N5C6 995 aaKnown RBP23.24■■□□□ 1.31
PDCD2-204ENST00000453163 BRWD3Q6RI45 1802 aa23.24■■□□□ 1.31
PDCD2-204ENST00000453163 KRT2P35908 639 aa23.24■■□□□ 1.31
PDCD2-204ENST00000453163 C12orf60Q5U649 245 aa23.24■■□□□ 1.31
PDCD2-204ENST00000453163 DYNLL2Q96FJ2 89 aa23.24■■□□□ 1.31
PDCD2-204ENST00000453163 RCSD1Q6JBY9 416 aa23.23■■□□□ 1.31
PDCD2-204ENST00000453163 KRBA2Q6ZNG9 492 aa23.23■■□□□ 1.31
PDCD2-204ENST00000453163 CNNM3Q8NE01 707 aa23.23■■□□□ 1.31
PDCD2-204ENST00000453163 C15orf52Q6ZUT6 534 aaKnown RBP23.23■■□□□ 1.31
PDCD2-204ENST00000453163 CACTINQ8WUQ7 758 aaKnown RBP23.22■■□□□ 1.31
PDCD2-204ENST00000453163 QTRT2Q9H974 415 aaKnown RBP23.22■■□□□ 1.31
PDCD2-204ENST00000453163 CD209Q9NNX6 404 aa23.22■■□□□ 1.31
PDCD2-204ENST00000453163 GSTO1P78417 241 aa23.22■■□□□ 1.31
PDCD2-204ENST00000453163 DDR1Q08345 913 aa23.22■■□□□ 1.31
PDCD2-204ENST00000453163 TGFBRAP1Q8WUH2 860 aa23.22■■□□□ 1.31
PDCD2-204ENST00000453163 CCDC94Q9BW85 323 aaPredicted RBP23.22■■□□□ 1.31
PDCD2-204ENST00000453163 TRIM37O94972 964 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 TFAP4Q01664 338 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 RBM17Q96I25 401 aaKnown RBP23.21■■□□□ 1.31
PDCD2-204ENST00000453163 FOXN1O15353 648 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 BAG3O95817 575 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 NCAPHQ15003 741 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 NPY5RQ15761 445 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 IL17RBQ9NRM6 502 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 GGA1Q9UJY5 639 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 CEP131Q9UPN4 1083 aa23.21■■□□□ 1.31
PDCD2-204ENST00000453163 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
PDCD2-204ENST00000453163 FOXP4Q8IVH2 680 aaPredicted RBP23.2■■□□□ 1.3
PDCD2-204ENST00000453163 SRPRBQ9Y5M8 271 aaKnown RBP23.2■■□□□ 1.3
PDCD2-204ENST00000453163 ARID5BQ14865 1188 aa23.2■■□□□ 1.3
PDCD2-204ENST00000453163 RTFDC1Q9BY42 306 aaPredicted RBP23.2■■□□□ 1.3
PDCD2-204ENST00000453163 ROBO3Q96MS0 1386 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 WNT7AO00755 349 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 ATP2B4P23634 1241 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 PPP4CP60510 307 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 ZNF710Q8N1W2 664 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 TRIM75PA6NK02 468 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 POLR2DO15514 142 aaKnown RBP23.19■■□□□ 1.3
PDCD2-204ENST00000453163 MAPKAPK5Q8IW41 473 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 SLC44A5Q8NCS7 719 aa23.19■■□□□ 1.3
PDCD2-204ENST00000453163 NOL10Q9BSC4 688 aaKnown RBP23.19■■□□□ 1.3
PDCD2-204ENST00000453163 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
PDCD2-204ENST00000453163 USP49Q70CQ1 688 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 CSRNP2Q9H175 543 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 SAP30BPQ9UHR5 308 aaKnown RBP23.18■■□□□ 1.3
PDCD2-204ENST00000453163 PCDHA5Q9Y5H7 936 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 IGSF3O75054 1194 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 FILIP1Q7Z7B0 1213 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 ZNF579Q8NAF0 562 aaKnown RBP23.18■■□□□ 1.3
PDCD2-204ENST00000453163 TNFRSF25Q93038 417 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 KAT14Q9H8E8 782 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 MKNK2Q9HBH9 465 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 POLLQ9UGP5 575 aa23.18■■□□□ 1.3
PDCD2-204ENST00000453163 POLRMTO00411 1230 aaKnown RBP23.17■■□□□ 1.3
PDCD2-204ENST00000453163 IL1R1P14778 569 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 PLCD1P51178 756 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 BRMS1Q9HCU9 246 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 USP17L3A6NCW0 530 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 USP17L4A6NCW7 530 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 LDHCP07864 332 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 SCG2P13521 617 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 BTDP43251 543 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 MDM2Q00987 491 aaPredicted RBP23.17■■□□□ 1.3
PDCD2-204ENST00000453163 USP17L1Q7RTZ2 530 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 PDILTQ8N807 584 aa23.17■■□□□ 1.3
PDCD2-204ENST00000453163 KRT27Q7Z3Y8 459 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 LRRC8AQ8IWT6 810 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 AMOTL1Q8IY63 956 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 PNMA1Q8ND90 353 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 SERTAD1Q9UHV2 236 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 SMTNL1A8MU46 457 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 LMOD1P29536 600 aaPredicted RBP23.16■■□□□ 1.3
PDCD2-204ENST00000453163 TBC1D16Q8TBP0 767 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 ARID3AQ99856 593 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 XPO4Q9C0E2 1151 aaKnown RBP23.16■■□□□ 1.3
PDCD2-204ENST00000453163 IFNKQ9P0W0 207 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 LTBP1Q14766 1721 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 BBOX1O75936 387 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 SMC2O95347 1197 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
PDCD2-204ENST00000453163 DGKHQ86XP1 1220 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 HSD3B7Q9H2F3 369 aa23.16■■□□□ 1.3
PDCD2-204ENST00000453163 DDX60LQ5H9U9 1706 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms