RNA–Protein interactions for RNA: ENST00000452464.6

SCARB2-202, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2 BASIC

Gene SCARB2, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-202ENST00000452464 RAB3GAP1Q15042 981 aa14.38□□□□□ -0.11
SCARB2-202ENST00000452464 CERKLQ49MI3 558 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-202ENST00000452464 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
SCARB2-202ENST00000452464 CRISPLD2Q9H0B8 497 aa14.38□□□□□ -0.11
SCARB2-202ENST00000452464 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
SCARB2-202ENST00000452464 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
SCARB2-202ENST00000452464 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
SCARB2-202ENST00000452464 POLR3DP05423 398 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-202ENST00000452464 ERVK-9P63128 1117 aa14.37□□□□□ -0.11
SCARB2-202ENST00000452464 ERVK-24P63145 666 aa14.37□□□□□ -0.11
SCARB2-202ENST00000452464 CRNKL1Q9BZJ0 848 aaKnown RBP14.37□□□□□ -0.11
SCARB2-202ENST00000452464 LRRCC1Q9C099 1032 aa14.37□□□□□ -0.11
SCARB2-202ENST00000452464 TCRBV5S4A2TA0A5A2 114 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L15C9J2P7 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L13C9JLJ4 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L11C9JVI0 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L18D6R9N7 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L22D6RA61 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L17D6RBQ6 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L19D6RCP7 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L20D6RJB6 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 CYP2B6P20813 491 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 USP17L24Q0WX57 530 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 ABCB5Q2M3G0 1257 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 PAWRQ96IZ0 340 aaKnown RBP14.36□□□□□ -0.11
SCARB2-202ENST00000452464 C12orf42Q96LP6 360 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
SCARB2-202ENST00000452464 PAGR1Q9BTK6 254 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 EMILIN3Q9NT22 766 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
SCARB2-202ENST00000452464 ZKSCAN1P17029 563 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-202ENST00000452464 RGS2P41220 211 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 ZYXQ15942 572 aaKnown RBP14.35□□□□□ -0.11
SCARB2-202ENST00000452464 LCORLQ8N3X6 602 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
SCARB2-202ENST00000452464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCARB2-202ENST00000452464 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
SCARB2-202ENST00000452464 RBPJLQ9UBG7 517 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 RABGAP1Q9Y3P9 1069 aa14.35□□□□□ -0.11
SCARB2-202ENST00000452464 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 ATP5JP18859 108 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 TRIB2Q92519 343 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 HAUS7Q99871 368 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 TXNRD2Q9NNW7 524 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 IVNS1ABPQ9Y6Y0 642 aa14.34□□□□□ -0.11
SCARB2-202ENST00000452464 SMIM22K7EJ46 135 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
SCARB2-202ENST00000452464 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 SDR42E1Q8WUS8 393 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
SCARB2-202ENST00000452464 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.12
SCARB2-202ENST00000452464 RANBP2P49792 3224 aaKnown RBP14.33□□□□□ -0.12
SCARB2-202ENST00000452464 PLXNB2O15031 1838 aa14.32□□□□□ -0.12
SCARB2-202ENST00000452464 MPHOSPH10O00566 681 aaKnown RBP14.32□□□□□ -0.12
SCARB2-202ENST00000452464 PRKAB2O43741 272 aa14.32□□□□□ -0.12
SCARB2-202ENST00000452464 CYP2D6P10635 497 aa14.32□□□□□ -0.12
SCARB2-202ENST00000452464 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
SCARB2-202ENST00000452464 CATSPERGQ6ZRH7 1159 aa14.32□□□□□ -0.12
SCARB2-202ENST00000452464 APBA2Q99767 749 aa14.32□□□□□ -0.12
SCARB2-202ENST00000452464 MBD4O95243 580 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 VCAM1P19320 739 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 ADD2P35612 726 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 PLCD1P51178 756 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 Q3C1V9 767 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 PORCNQ9H237 461 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 SWAP70Q9UH65 585 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 OGDHLQ9ULD0 1010 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 PARP14Q460N5 1801 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 SHMT1P34896 483 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 TRIM32Q13049 653 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 MAP2K5Q13163 448 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 MORN1Q5T089 497 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 MFSD14CQ5VZR4 134 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 C11orf49Q9H6J7 331 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 HOXC10Q9NYD6 342 aa14.31□□□□□ -0.12
SCARB2-202ENST00000452464 CYP2D7A0A087X1C5 515 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 PEX10O60683 326 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-202ENST00000452464 TMEM179Q6ZVK1 233 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 DIS3LQ8TF46 1054 aaKnown RBP14.3□□□□□ -0.12
SCARB2-202ENST00000452464 USP6NLQ92738 828 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 RPAP3Q9H6T3 665 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-202ENST00000452464 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-202ENST00000452464 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 ECHDC1Q9NTX5 307 aa14.3□□□□□ -0.12
SCARB2-202ENST00000452464 DNAH12Q6ZR08 3092 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms