RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DIAPH3Q9NSV4 1193 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 NDFIP2Q9NV92 336 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 PSD3Q9NYI0 1048 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 GGA1Q9UJY5 639 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 HCN2Q9UL51 889 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 ATXN7L1Q9ULK2 861 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 PCDHGC4Q9Y5F7 938 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 DENND4BO75064 1496 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 CECR2Q9BXF3 1484 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MBD5Q9P267 1494 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 HFM1A2PYH4 1435 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MTUS2Q5JR59 1369 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PLEKHH1Q9ULM0 1364 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 MROH2BQ7Z745 1585 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 REREQ9P2R6 1566 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PRDM15P57071 1507 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PLB1Q6P1J6 1458 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 TEX14Q8IWB6 1497 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PRXQ9BXM0 1461 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 hCG_2014768A0A024R1R8 64 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 A0A1B0GUL7 405 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 FAM221AA4D161 298 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 KHNYNO15037 678 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 SMAD7O15105 426 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 RAB11FIP3O75154 756 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 F13A1P00488 732 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 MAPTP10636 758 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 HOXB4P17483 251 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 FGFR3P22607 806 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 COL8A1P27658 744 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 MAGEA8P43361 318 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 GIPRP48546 466 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 IGBP1P78318 339 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PLAURQ03405 335 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 RABEP1Q15276 862 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZSCAN26Q16670 478 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 TNNI3KQ59H18 835 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 XP32Q5T750 250 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 RNF187Q5TA31 235 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 BNC2Q6ZN30 1099 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCDC81Q6ZN84 652 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 DHX32Q7L7V1 743 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 SRLQ86TD4 932 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCDC84Q86UT8 332 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 MSL3Q8N5Y2 521 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 CELF2-AS1Q8N7Q2 184 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 GOLGA6L1Q8N7Z2 621 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 FAM169BQ8N8A8 192 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 SNRNP27Q8WVK2 155 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 GBP4Q96PP9 640 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PNMA5Q96PV4 448 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 HHIPQ96QV1 700 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 NOL10Q9BSC4 688 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCDC113Q9H0I3 377 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF576Q9H609 170 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 CWC22Q9HCG8 908 aaKnown RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 ANAPC4Q9UJX5 808 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 GDF2Q9UK05 429 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 PPT2Q9UMR5 302 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 SMC3Q9UQE7 1217 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 SYNMO15061 1565 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 KDM5CP41229 1560 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 TONSLQ96HA7 1378 aa4.27□□□□□ -1.73
HMGB3P8-201ENST00000449709 ATP10AO60312 1499 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 LRRC9Q6ZRR7 1453 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 RAPGEF2Q9Y4G8 1499 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 DCDC2BA2VCK2 349 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 ADAM23O75077 832 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 EIF3JO75822 258 aaKnown RBP4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 AMPD1P23109 780 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 PAX7P23759 505 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 MAGEA9P43362 315 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 NRLP54845 237 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 EIF6P56537 245 aaKnown RBP4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 ICA1Q05084 483 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 ADCY2Q08462 1091 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 SPEM2Q0P670 501 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 SLC5A9Q2M3M2 681 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 SEZ6Q53EL9 994 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 C20orf194Q5TEA3 1177 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 CCDC30Q5VVM6 783 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 JAKMIP3Q5VZ66 844 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 LINC00114Q6XXX2 140 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 DDX46Q7L014 1031 aaKnown RBP4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 EXOC8Q8IYI6 725 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 FAM9BQ8IZU0 186 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 TXLNBQ8N3L3 684 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 LILRB2Q8N423 598 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 ZNF513Q8N8E2 541 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 FAM184AQ8NB25 1140 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 FBXO27Q8NI29 283 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 GATAD2BQ8WXI9 593 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 CRBNQ96SW2 442 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 SLC30A3Q99726 388 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 PAIP2Q9BPZ3 127 aaKnown RBP4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 KANSL2Q9H9L4 492 aa4.26□□□□□ -1.73
HMGB3P8-201ENST00000449709 IFT57Q9NWB7 429 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms