RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 VAMP4O75379 141 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 RHBDL3P58872 404 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 GRB14Q14449 540 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 SKIV2LQ15477 1246 aaKnown RBP15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 RAB30Q15771 203 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 OLFML2BQ68BL8 750 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 SLC28A3Q9HAS3 691 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 C11orf16Q9NQ32 467 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 ABCF2Q9UG63 623 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 PHF24Q9UPV7 400 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 ATAD5Q96QE3 1844 aa15.68■□□□□ 0.1
AC004540.1-204ENST00000449537 FAM86C2PA6NEL3 165 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 SMIM22K7EJ46 135 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 CNMDO75829 334 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 TIMP1P01033 207 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 SPTY2D1Q68D10 685 aaPredicted RBP15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L2Q6R6M4 530 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 ANKRD44Q8N8A2 993 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 HERVK_113Q902F9 699 aa15.67■□□□□ 0.1
AC004540.1-204ENST00000449537 EYA2O00167 538 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 ERC2O15083 957 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 MAP4K4O95819 1239 aaPredicted RBP15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 FAAP100Q0VG06 881 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 PPIGQ13427 754 aaKnown RBP eCLIP15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 PRAMEF19Q5SWL8 479 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 C16orf59Q7L2K0 433 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 TOX2Q96NM4 488 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 PI4KBQ9UBF8 816 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 MROH7-TTC4A0A0A0MT08 1334 aa15.66■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L15C9J2P7 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L13C9JLJ4 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L11C9JVI0 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L18D6R9N7 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L22D6RA61 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L17D6RBQ6 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L19D6RCP7 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L20D6RJB6 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 USP17L24Q0WX57 530 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 FAM47AQ5JRC9 791 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 RASIP1Q5U651 963 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
AC004540.1-204ENST00000449537 STRNO43815 780 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 TLL1O43897 1013 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 PHKA1P46020 1223 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 JAG1P78504 1218 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 ANKRD33Q7Z3H0 272 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 RNF180Q86T96 592 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 GINM1Q9NU53 330 aa15.64■□□□□ 0.09
AC004540.1-204ENST00000449537 PI4K2BG5E9Z4 385 aa15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 LDHCP07864 332 aa15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 ZNF365Q70YC5 407 aa15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 KHSRPQ92945 711 aaKnown RBP eCLIP15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 XPNPEP3Q9NQH7 507 aa15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 SLC5A4Q9NY91 659 aa15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 CEP126Q9P2H0 1117 aa15.63■□□□□ 0.09
AC004540.1-204ENST00000449537 A0A1W2PQ45 241 aaPredicted RBP15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 A0A1W2PQY0 241 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 PRR33A8MZF0 331 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 RARBP10826 455 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 ADORA2AP29274 412 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 MECOMQ03112 1051 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 CATSPERGQ6ZRH7 1159 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 ERICH6Q7L0X2 663 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 FOXP4Q8IVH2 680 aaPredicted RBP15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 WWC1Q8IX03 1113 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 DHX36Q9H2U1 1008 aaKnown RBP15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 BTBD7Q9P203 1132 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 COG5Q9UP83 839 aa15.62■□□□□ 0.09
AC004540.1-204ENST00000449537 SMCHD1A6NHR9 2005 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 ZBTB22O15209 634 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 PGK1P00558 417 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 ACRP10323 421 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 CSF2RAP15509 400 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 PSRC1Q6PGN9 363 aaPredicted RBP15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 LBX2Q6XYB7 198 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 ATG9AQ7Z3C6 839 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 TMEM199Q8N511 208 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 TRIM34Q9BYJ4 488 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 IL16Q14005 1332 aa15.61■□□□□ 0.09
AC004540.1-204ENST00000449537 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 COBLO75128 1261 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 GDF11O95390 407 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 GSTO1P78417 241 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 CCDC102BQ68D86 513 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 CRACR2BQ8N4Y2 399 aaPredicted RBP15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 C12orf42Q96LP6 360 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 MTIF3Q9H2K0 278 aaKnown RBP15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 TBX21Q9UL17 535 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 ZBTB21Q9ULJ3 1066 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 YBX2Q9Y2T7 364 aaKnown RBP15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 CHD9Q3L8U1 2897 aa15.6■□□□□ 0.09
AC004540.1-204ENST00000449537 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms