RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 LRRFIP2Q9Y608 721 aaKnown RBP9.2□□□□□ -0.94
RBM39-218ENST00000449489 TRIM75PA6NK02 468 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 APAF1O14727 1248 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 MSCO60682 206 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 MAP3K12Q12852 859 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 PACS2Q86VP3 889 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 ZFPM1Q8IX07 1006 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 ZNF687Q8N1G0 1237 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 FAM117AQ9C073 453 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 USP40Q9NVE5 1235 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 MYH13Q9UKX3 1938 aa9.19□□□□□ -0.94
RBM39-218ENST00000449489 ALDH1L1O75891 902 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 ZKSCAN1P17029 563 aaPredicted RBP9.18□□□□□ -0.94
RBM39-218ENST00000449489 CYP2B6P20813 491 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 FGFR2P21802 821 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 MAPK4P31152 587 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 HOXA7P31268 230 aaPredicted RBP9.18□□□□□ -0.94
RBM39-218ENST00000449489 RGS3P49796 1198 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 RLFQ13129 1914 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 FRMPD3Q5JV73 1810 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 ZNF280CQ8ND82 737 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 ASCC2Q9H1I8 757 aaPredicted RBP9.18□□□□□ -0.94
RBM39-218ENST00000449489 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 RAPGEFL1Q9UHV5 662 aa9.18□□□□□ -0.94
RBM39-218ENST00000449489 DNM1LO00429 736 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 IFIT1P09914 478 aaKnown RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 RGS2P41220 211 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 PDE3AQ14432 1141 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 PUM3Q15397 648 aaKnown RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 RABL6Q3YEC7 729 aaPredicted RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 METTL24Q5JXM2 366 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 C9orf50Q5SZB4 431 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 MORN1Q5T089 497 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 C1orf53Q5VUE5 145 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 LPAR1Q92633 364 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 C1QTNF1Q9BXJ1 281 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 SENP6Q9GZR1 1112 aaPredicted RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 OSBPL5Q9H0X9 879 aaPredicted RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 C9orf78Q9NZ63 289 aaPredicted RBP9.17□□□□□ -0.94
RBM39-218ENST00000449489 MYH2Q9UKX2 1941 aa9.17□□□□□ -0.94
RBM39-218ENST00000449489 UTYO14607 1347 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 GAKO14976 1311 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 IL16Q14005 1332 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 DDTLA6NHG4 134 aaPredicted RBP9.16□□□□□ -0.94
RBM39-218ENST00000449489 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
RBM39-218ENST00000449489 CCND3P30281 292 aaPredicted RBP9.16□□□□□ -0.94
RBM39-218ENST00000449489 ZEB1P37275 1124 aaPredicted RBP9.16□□□□□ -0.94
RBM39-218ENST00000449489 RTP1P59025 263 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 SPP2Q13103 211 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 SNX17Q15036 470 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 AKNAD1Q5T1N1 836 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 TSR2Q969E8 191 aaKnown RBP9.16□□□□□ -0.94
RBM39-218ENST00000449489 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
RBM39-218ENST00000449489 ASB2Q96Q27 587 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 APBA2Q99767 749 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 WDFY4Q6ZS81 3184 aa9.16□□□□□ -0.94
RBM39-218ENST00000449489 MAP4K4O95819 1239 aaPredicted RBP9.15□□□□□ -0.94
RBM39-218ENST00000449489 PRDX5P30044 214 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.94
RBM39-218ENST00000449489 HMGCS2P54868 508 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 LRRC24Q50LG9 513 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 ZSCAN29Q8IWY8 852 aaPredicted RBP9.15□□□□□ -0.94
RBM39-218ENST00000449489 USP38Q8NB14 1042 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 LPIN2Q92539 896 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 WDR18Q9BV38 432 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 DDX20Q9UHI6 824 aaKnown RBP9.15□□□□□ -0.94
RBM39-218ENST00000449489 CACNA1AO00555 2505 aa9.15□□□□□ -0.94
RBM39-218ENST00000449489 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 VAMP4O75379 141 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 IGHA2P01877 340 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 HOXC6P09630 235 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 CAP2P40123 477 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 HERVK_113P62684 666 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 IRX3P78415 501 aaPredicted RBP9.14□□□□□ -0.95
RBM39-218ENST00000449489 MRPS5P82675 430 aaKnown RBP9.14□□□□□ -0.95
RBM39-218ENST00000449489 GRIN2CQ14957 1233 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 MFSD14CQ5VZR4 134 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 SLC39A5Q6ZMH5 540 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 GPR142Q7Z601 462 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 PLEKHH3Q7Z736 793 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 ZGPATQ8N5A5 531 aaKnown RBP9.14□□□□□ -0.95
RBM39-218ENST00000449489 ARRDC4Q8NCT1 418 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 BADQ92934 168 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
RBM39-218ENST00000449489 P2RX7Q99572 595 aaKnown RBP9.14□□□□□ -0.95
RBM39-218ENST00000449489 AS3MTQ9HBK9 375 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 THEGQ9P2T0 379 aa9.14□□□□□ -0.95
RBM39-218ENST00000449489 RBPJLQ9UBG7 517 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms