RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 CEP95Q96GE4 821 aa13.97□□□□□ -0.17
SCAP-208ENST00000448217 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
SCAP-208ENST00000448217 ZKSCAN3Q9BRR0 538 aa13.97□□□□□ -0.17
SCAP-208ENST00000448217 SENP2Q9HC62 589 aa13.97□□□□□ -0.17
SCAP-208ENST00000448217 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
SCAP-208ENST00000448217 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
SCAP-208ENST00000448217 MYH4Q9Y623 1939 aa13.97□□□□□ -0.17
SCAP-208ENST00000448217 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 ADM5C9JUS6 153 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 DDAH1O94760 285 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 TTLL1O95922 423 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 ASNSP08243 561 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 CALM1P0DP23 149 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 CALM2P0DP24 149 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 CALM3P0DP25 149 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 TOP1P11387 765 aaKnown RBP13.96□□□□□ -0.17
SCAP-208ENST00000448217 JAG1P78504 1218 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 TROAPQ12815 778 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 MAP3K11Q16584 847 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 NOL9Q5SY16 702 aaKnown RBP13.96□□□□□ -0.17
SCAP-208ENST00000448217 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 GTF3C6Q969F1 213 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 CDCA5Q96FF9 252 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 ZBTB21Q9ULJ3 1066 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 HPS5Q9UPZ3 1129 aa13.96□□□□□ -0.17
SCAP-208ENST00000448217 USP2O75604 605 aaPredicted RBP13.95□□□□□ -0.18
SCAP-208ENST00000448217 LARGE1O95461 756 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 GH2P01242 217 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 SIAH1Q8IUQ4 282 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCAP-208ENST00000448217 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 GLIS2Q9BZE0 524 aaPredicted RBP13.95□□□□□ -0.18
SCAP-208ENST00000448217 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
SCAP-208ENST00000448217 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
SCAP-208ENST00000448217 ZBTB43O43298 467 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
SCAP-208ENST00000448217 GDF11O95390 407 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 NF2P35240 595 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 ST3GAL1Q11201 340 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 SEPT2Q15019 361 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 CATIPQ7Z7H3 387 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
SCAP-208ENST00000448217 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
SCAP-208ENST00000448217 KAT14Q9H8E8 782 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
SCAP-208ENST00000448217 OTOFQ9HC10 1997 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 PHIPQ8WWQ0 1821 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 DHX16O60231 1041 aaKnown RBP13.93□□□□□ -0.18
SCAP-208ENST00000448217 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 FKBP1BP68106 108 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 ICA1Q05084 483 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 MAP1SQ66K74 1059 aaPredicted RBP13.93□□□□□ -0.18
SCAP-208ENST00000448217 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 SCYL3Q8IZE3 742 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
SCAP-208ENST00000448217 STX8Q9UNK0 236 aa13.93□□□□□ -0.18
SCAP-208ENST00000448217 CCDC196A0A1B0GTZ2 297 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 INPP5BP32019 993 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 IREB2P48200 963 aaKnown RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 METAP2P50579 478 aaKnown RBP eCLIP13.92□□□□□ -0.186e-6■□□□□ 10.3
SCAP-208ENST00000448217 MAP3K9P80192 1104 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 SCRN1Q12765 414 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 NOL8Q76FK4 1167 aaKnown RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 GMCL1P1Q8NEA9 526 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 WRNIP1Q96S55 665 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 WDR18Q9BV38 432 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 FAM217BQ9NTX9 383 aaPredicted RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 RBM28Q9NW13 759 aaKnown RBP13.92□□□□□ -0.18
SCAP-208ENST00000448217 CLIP2Q9UDT6 1046 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 TMX2Q9Y320 296 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 TRPM7Q96QT4 1865 aa13.92□□□□□ -0.18
SCAP-208ENST00000448217 GRM4Q14833 912 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 NTRK3Q16288 839 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 LDLRAD1Q5T700 205 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 DLK2Q6UY11 383 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.91□□□□□ -0.18
SCAP-208ENST00000448217 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 SH2D4AQ9H788 454 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
SCAP-208ENST00000448217 ARHGEF10LQ9HCE6 1279 aa13.91□□□□□ -0.18
SCAP-208ENST00000448217 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
SCAP-208ENST00000448217 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.91□□□□□ -0.18
SCAP-208ENST00000448217 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
SCAP-208ENST00000448217 GOLGA8AA7E2F4 631 aa13.9□□□□□ -0.18
SCAP-208ENST00000448217 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
SCAP-208ENST00000448217 KIF3CO14782 793 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms