RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
SMC6-206ENST00000446852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.14■□□□□ 0.82
SMC6-206ENST00000446852 ADCY5O95622 1261 aa20.14■□□□□ 0.82
SMC6-206ENST00000446852 RASA1P20936 1047 aa20.14■□□□□ 0.82
SMC6-206ENST00000446852 CMA1P23946 247 aa20.14■□□□□ 0.82
SMC6-206ENST00000446852 LUZP1Q86V48 1076 aa20.14■□□□□ 0.82
SMC6-206ENST00000446852 ZNF622Q969S3 477 aaKnown RBP eCLIP20.14■□□□□ 0.824e-7■■■□□ 15.7
SMC6-206ENST00000446852 CBX8Q9HC52 389 aa20.14■□□□□ 0.82
SMC6-206ENST00000446852 NT5C2P49902 561 aa20.14■□□□□ 0.81
SMC6-206ENST00000446852 DGKHQ86XP1 1220 aa20.14■□□□□ 0.81
SMC6-206ENST00000446852 MXD3Q9BW11 206 aa20.14■□□□□ 0.81
SMC6-206ENST00000446852 DNAJC25Q9H1X3 360 aa20.14■□□□□ 0.81
SMC6-206ENST00000446852 MYH8P13535 1937 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 ZNF646O15015 1829 aaPredicted RBP20.13■□□□□ 0.81
SMC6-206ENST00000446852 PFKFB1P16118 471 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 ANKS1AQ92625 1134 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 ERCC4Q92889 916 aaPredicted RBP20.13■□□□□ 0.81
SMC6-206ENST00000446852 PHF20Q9BVI0 1012 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 KAT14Q9H8E8 782 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 F8W031 263 aaPredicted RBP20.13■□□□□ 0.81
SMC6-206ENST00000446852 TSPY3P0CV98 308 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 TSPY8P0CW00 308 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 POTEAQ6S8J7 498 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.13■□□□□ 0.81
SMC6-206ENST00000446852 SCN9AQ15858 1988 aa20.13■□□□□ 0.81
SMC6-206ENST00000446852 EZH2Q15910 746 aaKnown RBP20.12■□□□□ 0.81
SMC6-206ENST00000446852 SHC4Q6S5L8 630 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 C16orf86Q6ZW13 317 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 ZSCAN30Q86W11 494 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 JMYQ8N9B5 988 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 PNMA1Q8ND90 353 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 ZNF444Q8N0Y2 327 aaPredicted RBP20.12■□□□□ 0.81
SMC6-206ENST00000446852 CLIC6Q96NY7 704 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 TCP11L1Q9NUJ3 509 aa20.12■□□□□ 0.81
SMC6-206ENST00000446852 A0A087WWV3 80 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 XBP1P17861 261 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 CDK8P49336 464 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 RILPL1Q5EBL4 403 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 SUGT1Q9Y2Z0 365 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 FAM205CA6NFA0 338 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 ZNF202O95125 648 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 ZNF165P49910 485 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 EN1Q05925 392 aaPredicted RBP20.11■□□□□ 0.81
SMC6-206ENST00000446852 NPY5RQ15761 445 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 SLC15A2Q16348 729 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 C11orf57Q6ZUT1 292 aaPredicted RBP20.11■□□□□ 0.81
SMC6-206ENST00000446852 SDF4Q9BRK5 362 aa20.11■□□□□ 0.81
SMC6-206ENST00000446852 CLCN1P35523 988 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 CAMKK2Q96RR4 588 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.1■□□□□ 0.81
SMC6-206ENST00000446852 TTF2Q9UNY4 1162 aaKnown RBP20.1■□□□□ 0.81
SMC6-206ENST00000446852 HPSEQ9Y251 543 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 PCDHB6Q9Y5E3 794 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 VEGFAP15692 232 aaPredicted RBP20.1■□□□□ 0.81
SMC6-206ENST00000446852 STX1AQ16623 288 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 EARS2Q5JPH6 523 aaKnown RBP20.1■□□□□ 0.81
SMC6-206ENST00000446852 TMX4Q9H1E5 349 aaPredicted RBP20.1■□□□□ 0.81
SMC6-206ENST00000446852 CABP5Q9NP86 173 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 CCDC39Q9UFE4 941 aa20.1■□□□□ 0.81
SMC6-206ENST00000446852 KIF5BP33176 963 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 KRT2P35908 639 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 RESP18Q5W5W9 173 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 STAG2Q8N3U4 1231 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 FAM237AA0A1B0GTK4 181 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 H0YIN7 160 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 CUTAO60888 179 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 CHRNA5P30532 468 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 CCDC178Q5BJE1 867 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 STYK1Q6J9G0 422 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 EYA3Q99504 573 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 ZNF287Q9HBT7 754 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 NOL7Q9UMY1 257 aaKnown RBP20.09■□□□□ 0.81
SMC6-206ENST00000446852 STX8Q9UNK0 236 aa20.09■□□□□ 0.81
SMC6-206ENST00000446852 SCG2P13521 617 aa20.08■□□□□ 0.81
SMC6-206ENST00000446852 SCNN1DP51172 638 aa20.08■□□□□ 0.81
SMC6-206ENST00000446852 GRM4Q14833 912 aa20.08■□□□□ 0.81
SMC6-206ENST00000446852 PIBF1Q8WXW3 757 aa20.08■□□□□ 0.81
SMC6-206ENST00000446852 TMEM47Q9BQJ4 181 aa20.08■□□□□ 0.81
SMC6-206ENST00000446852 PICALMQ13492 652 aa20.08■□□□□ 0.8
SMC6-206ENST00000446852 PFKFB3Q16875 520 aaPredicted RBP20.08■□□□□ 0.8
SMC6-206ENST00000446852 KRI1Q8N9T8 703 aaKnown RBP20.08■□□□□ 0.8
SMC6-206ENST00000446852 TNFRSF25Q93038 417 aa20.08■□□□□ 0.8
SMC6-206ENST00000446852 DDX4Q9NQI0 724 aaKnown RBP20.08■□□□□ 0.8
SMC6-206ENST00000446852 MAD2L2Q9UI95 211 aa20.08■□□□□ 0.8
SMC6-206ENST00000446852 CAVIN2O95810 425 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 SYKP43405 635 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 GRIN1Q05586 938 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 NOM1Q5C9Z4 860 aaKnown RBP20.07■□□□□ 0.8
SMC6-206ENST00000446852 KIAA1468Q9P260 1216 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 FBXO2Q9UK22 296 aaPredicted RBP20.07■□□□□ 0.8
SMC6-206ENST00000446852 G3V3G9 751 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 ATP2B1P20020 1258 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 IQCB1Q15051 598 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 SLC35G1Q2M3R5 365 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 DCAF8Q5TAQ9 597 aa20.07■□□□□ 0.8
SMC6-206ENST00000446852 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms