RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MCF2L2Q86YR7 1114 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 WRNIP1Q96S55 665 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 HACL1Q9UJ83 578 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 CCNT1O60563 726 aaKnown RBP16■□□□□ 0.15
SMARCA4-204ENST00000444061 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
SMARCA4-204ENST00000444061 CETN1Q12798 172 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 CCDC150Q8NCX0 1101 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 DHX58Q96C10 678 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 TCHPQ9BT92 498 aa16■□□□□ 0.15
SMARCA4-204ENST00000444061 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
SMARCA4-204ENST00000444061 CHMP2AO43633 222 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 BMP3P12645 472 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 ADD1P35611 737 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 TCERG1LQ5VWI1 586 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 TMEM179Q6ZVK1 233 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 CMTR1Q8N1G2 835 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 PHLPP1O60346 1717 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 KCTD2Q14681 263 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 CCDC40Q4G0X9 1142 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 UTYO14607 1347 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 DKC1O60832 514 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 GH2P01242 217 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 SEPT11Q9NVA2 429 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 KCNJ14Q9UNX9 436 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 NT5C2P49902 561 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 MCTP2Q6DN12 878 aa15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 RSBN1LQ6PCB5 846 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-204ENST00000444061 VWA3AA6NCI4 1184 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 GCOM1H8Y6P7 765 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 POLR2MP0CAP2 368 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 SCARF1Q14162 830 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 GNPTABQ3T906 1256 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 GTF3C6Q969F1 213 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 IFT172Q9UG01 1749 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 FAM13AO94988 1023 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 AMNQ9BXJ7 453 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 JAK2O60674 1132 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 TTC38Q5R3I4 469 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 SPC24Q8NBT2 197 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 LRRC4BQ9NT99 713 aa15.98■□□□□ 0.15
SMARCA4-204ENST00000444061 ZMYM6O95789 1325 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 TXKP42681 527 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 ARHGEF16Q5VV41 709 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 HAUS3Q68CZ6 603 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 AZI2Q9H6S1 392 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 PRM3Q9NNZ6 103 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 PSMD14O00487 310 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 IGSF3O75054 1194 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 MTIF2P46199 727 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 ME3Q16798 604 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 CD2APQ9Y5K6 639 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 GMPSP49915 693 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 DCP1AQ9NPI6 582 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 SCG2P13521 617 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 IQUBQ8NA54 791 aa15.97■□□□□ 0.15
SMARCA4-204ENST00000444061 XRN1Q8IZH2 1706 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 GPS2Q13227 327 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 DPP9Q86TI2 863 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 CYP2D6P10635 497 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 RPS12P25398 132 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 ISM2Q6H9L7 571 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 PNMA3Q9UL41 463 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 ZHX2Q9Y6X8 837 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 DDX39AO00148 427 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 PFKFB2O60825 505 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 FBXO33Q7Z6M2 555 aa15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 GPBP1L1Q9HC44 474 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-204ENST00000444061 SLFNL1Q499Z3 407 aa15.96■□□□□ 0.14
SMARCA4-204ENST00000444061 PLIN2Q99541 437 aa15.96■□□□□ 0.14
SMARCA4-204ENST00000444061 A0A0U1RQG5 324 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 TESPA1A2RU30 521 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 FAM196BA6NMK8 535 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 ADCK5Q3MIX3 580 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 C9orf131Q5VYM1 1079 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 APOA5Q6Q788 366 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 DAGLAQ9Y4D2 1042 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 STAT2P52630 851 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 NSUN4Q96CB9 384 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 ZSWIM5Q9P217 1185 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 RFX5P48382 616 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 DDR1Q08345 913 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 STX1AQ16623 288 aa15.95■□□□□ 0.14
SMARCA4-204ENST00000444061 ANO1Q5XXA6 986 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms