RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 H3BRB1 525 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 GPR182O15218 404 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 GADD45BO75293 160 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 PEX14O75381 377 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 ITIH2P19823 946 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 COPB2P35606 906 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 SATB1Q01826 763 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 ANGEL2Q5VTE6 544 aaKnown RBP5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 DNAJC14Q6Y2X3 702 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 KCNB2Q92953 911 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 FAM84AQ96KN4 292 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 NIF3L1Q9GZT8 377 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 DNAJC25Q9H1X3 360 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 TUT1Q9H6E5 874 aaKnown RBP5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 RBM28Q9NW13 759 aaKnown RBP5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 PNMA2Q9UL42 364 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 SNX11Q9Y5W9 270 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 RPGRIP1LQ68CZ1 1315 aa5.89□□□□□ -1.47
HMGB3P9-201ENST00000441799 LRRC10BA6NIK2 292 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 PDE3BQ13370 1112 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 FYB2Q5VWT5 728 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 MPRIPQ6WCQ1 1025 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZNF662Q6ZS27 426 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 GET4Q7L5D6 327 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 GLYCTKQ8IVS8 523 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 TMEM39AQ9NV64 488 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 SYNPO2Q9UMS6 1093 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 TRAK1Q9UPV9 953 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 COMMD10Q9Y6G5 202 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 WASHC2AQ641Q2 1341 aa5.88□□□□□ -1.47
HMGB3P9-201ENST00000441799 NDUFB5O43674 189 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 PAX3P23760 479 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 KCNA1Q09470 495 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZRSR2Q15696 482 aaKnown RBP5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 MLANAQ16655 118 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 NKPD1Q17RQ9 610 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 ARHGAP27Q6ZUM4 889 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZSWIM9Q86XI8 627 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 C1QL4Q86Z23 238 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 SPACA3Q8IXA5 215 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZNF513Q8N8E2 541 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 RNF214Q8ND24 703 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 BHLHE22Q8NFJ8 381 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 C8orf37Q96NL8 207 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 CITED4Q96RK1 184 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 SLC38A3Q99624 504 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 CACNA2D2Q9NY47 1150 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 CTNND2Q9UQB3 1225 aa5.87□□□□□ -1.47
HMGB3P9-201ENST00000441799 ARAP1Q96P48 1450 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 RBM47A0AV96 593 aaKnown RBP5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 IGF2BP3O00425 579 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 KIF20AO95235 890 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 ARNTP27540 789 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 CFPP27918 469 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 NTF4P34130 210 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 FCGRTP55899 365 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 ERVK-24P63145 666 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 PI16Q6UXB8 463 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 DTHD1Q6ZMT9 781 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 UBE3DQ7Z6J8 389 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 AMOTL1Q8IY63 956 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 LSM14AQ8ND56 463 aaKnown RBP5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 LIN37Q96GY3 246 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 CSRNP1Q96S65 589 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 IRF2BPLQ9H1B7 796 aa5.86□□□□□ -1.47
HMGB3P9-201ENST00000441799 SYNRGQ9UMZ2 1314 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 CCDC194A0A1B0GVG4 234 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 FAM200BP0CF97 657 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZP2Q05996 745 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 PPP2R3AQ06190 1150 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZNF252P-AS1Q0IIN9 211 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 KCNMB1Q16558 191 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 SULF2Q8IWU5 870 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 ZCRB1Q8TBF4 217 aaKnown RBP5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 GPBAR1Q8TDU6 330 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 PNISRQ8TF01 805 aaKnown RBP5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 UBXN4Q92575 508 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 MAP7D2Q96T17 732 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 SENP7Q9BQF6 1050 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 SSU72Q9NP77 194 aaKnown RBP5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 FAM53CQ9NYF3 392 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 ABCF2Q9UG63 623 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 GPN3Q9UHW5 284 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 MRVI1Q9Y6F6 885 aa5.85□□□□□ -1.47
HMGB3P9-201ENST00000441799 BAZ1BQ9UIG0 1483 aaKnown RBP5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 VGLL3A8MV65 326 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 BDNFP23560 247 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 IKZF1Q13422 519 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 CDC37Q16543 378 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 C4orf46Q504U0 113 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 MAP1SQ66K74 1059 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 GIMAP6Q6P9H5 292 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 LCNL1Q6ZST4 164 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 ATL2Q8NHH9 583 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 ASB11Q8WXH4 323 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 PMM1Q92871 262 aa5.84□□□□□ -1.47
HMGB3P9-201ENST00000441799 ITFG2Q969R8 447 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms