RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 GPAA1O43292 621 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 DGAT1O75907 488 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 UFL1O94874 794 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 LDHCP07864 332 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 HSPD1P10809 573 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 SKIP12755 728 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 PDIA4P13667 645 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 CYP7A1P22680 504 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 GSTO1P78417 241 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 GPSM2P81274 684 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 BLOC1S2Q6QNY1 142 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 CCDC129Q6ZRS4 1044 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 C2CD5Q86YS7 1000 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 CERS3Q8IU89 383 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 DEPDC4Q8N2C3 294 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 TDRD7Q8NHU6 1098 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 TBC1D16Q8TBP0 767 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 TBC1D22AQ8WUA7 517 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 OSBP2Q969R2 916 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 NEK1Q96PY6 1258 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 STRBPQ96SI9 672 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 EYA3Q99504 573 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 ZC3H12CQ9C0D7 883 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 PUS7LQ9H0K6 701 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 SH2B1Q9NRF2 756 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 PDRG1Q9NUG6 133 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 RAI14Q9P0K7 980 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 ABCF2Q9UG63 623 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 NSFL1CQ9UNZ2 370 aaKnown RBP4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 COL4A1P02462 1669 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 CHD4Q14839 1912 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 WDR19Q8NEZ3 1342 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 IRS2Q9Y4H2 1338 aa4.7□□□□□ -1.66
HMGB1P37-201ENST00000439613 LAMA4Q16363 1823 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 KIAA1551Q9HCM1 1747 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 MAST2Q6P0Q8 1798 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 PALM3A6NDB9 673 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 FAM187AA6NFU0 413 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 E7EWF7 191 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 MBD4O95243 580 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 FGAP02671 866 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 APPP05067 770 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 LDHBP07195 334 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 NR3C2P08235 984 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 CYP21A2P08686 494 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 IL1R1P14778 569 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 RPS6KB1P23443 525 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 NT5C2P49902 561 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 AK2P54819 239 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 NUCB2P80303 420 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 FGD1P98174 961 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 DHX9Q08211 1270 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 TRDNQ13061 729 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 NNTQ13423 1086 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 CUL4AQ13619 759 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 SLFNL1Q499Z3 407 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 PKDCCQ504Y2 493 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 INTS6LQ5JSJ4 861 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 MSL1Q68DK7 614 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 GIMAP6Q6P9H5 292 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 DPP8Q6V1X1 898 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 DHX32Q7L7V1 743 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 DEFB132Q7Z7B7 95 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 RNF135Q8IUD6 432 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 CCDC116Q8IYX3 515 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 PHTF2Q8N3S3 785 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 SUPT20HQ8NEM7 779 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 HPS1Q92902 700 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 ZNF622Q969S3 477 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 TMX3Q96JJ7 454 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 TTC14Q96N46 770 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 NOL10Q9BSC4 688 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 UPF3BQ9BZI7 483 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 PPP1R12CQ9BZL4 782 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 COA1Q9GZY4 146 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 SLKQ9H2G2 1235 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 TFIP11Q9UBB9 837 aaKnown RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 IQSEC3Q9UPP2 1182 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 SUGT1Q9Y2Z0 365 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 LTBP1Q14766 1721 aa4.69□□□□□ -1.66
HMGB1P37-201ENST00000439613 MYH2Q9UKX2 1941 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 WTIPA6NIX2 430 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 BAG3O95817 575 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 PCP11498 1178 aaKnown RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 PTMSP20962 102 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 POLD1P28340 1107 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 MCM5P33992 734 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 DDIT3P35638 169 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 EXOSC10Q01780 885 aaKnown RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 MECOMQ03112 1051 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 CHAF1AQ13111 956 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 ADCK5Q3MIX3 580 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 SOGA3Q5TF21 947 aa4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 RALYLQ86SE5 291 aaKnown RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 DZIP1Q86YF9 867 aaKnown RBP4.68□□□□□ -1.66
HMGB1P37-201ENST00000439613 IFNL3Q8IZI9 196 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms