RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PCDHB14Q9Y5E9 798 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 IGF2BP3O00425 579 aaKnown RBP eCLIP5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 ATE1O95260 518 aa5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 GJA8P48165 433 aa5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 GNL2Q13823 731 aaKnown RBP5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 LETMD1Q6P1Q0 360 aa5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 PLD6Q8N2A8 252 aaKnown RBP5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 RASGRP4Q8TDF6 673 aa5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 PPP1R13LQ8WUF5 828 aa5.94□□□□□ -1.46
TRAPPC13-204ENST00000438419 PRNPP04156 253 aa5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 ZC3H6P61129 1189 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 COL9A2Q14055 689 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 CDH24Q86UP0 819 aa5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 SLFN12Q8IYM2 578 aa5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 REXO1Q8N1G1 1221 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 FAM13CQ8NE31 585 aa5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 DNAJB8Q8NHS0 232 aa5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 MKNK2Q9HBH9 465 aa5.93□□□□□ -1.46
TRAPPC13-204ENST00000438419 SLC22A31A6NKX4 558 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 PRR33A8MZF0 331 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 ZNF165P49910 485 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 GK5Q6ZS86 529 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 CAPN10Q9HC96 672 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 PRDM5Q9NQX1 630 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 KLHL3Q9UH77 587 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 GTF2IRD1Q9UHL9 959 aa5.92□□□□□ -1.46
TRAPPC13-204ENST00000438419 MCM4P33991 863 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 YARSP54577 528 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 MLECQ14165 292 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 NKPD1Q17RQ9 610 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 WFDC3Q8IUB2 231 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 NETO1Q8TDF5 533 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 CYB5D2Q8WUJ1 264 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 C8orf37Q96NL8 207 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 TINF2Q9BSI4 451 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 TNKS2Q9H2K2 1166 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 ANTXR1Q9H6X2 564 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 BSDC1Q9NW68 430 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 CCDC39Q9UFE4 941 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 CEP131Q9UPN4 1083 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 MAPK8IP1Q9UQF2 711 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 CEACAM5P06731 702 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 ITIH2P19823 946 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 TNNI2P48788 182 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 C22orf34Q6ZV56 151 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 VPS37DQ86XT2 251 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 SPACA3Q8IXA5 215 aa5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 BAHD1Q8TBE0 780 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 TPX2Q9ULW0 747 aaKnown RBP5.91□□□□□ -1.46
TRAPPC13-204ENST00000438419 ZNF865P0CJ78 1059 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 IMPDH2P12268 514 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 SOX9P48436 509 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 BNIP3Q12983 259 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 IFI16Q16666 785 aaKnown RBP5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 ARSHQ5FYA8 562 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 SFRP5Q5T4F7 317 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 SLC43A3Q8NBI5 491 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 BCL7CQ8WUZ0 217 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 ATG4CQ96DT6 458 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 SEC16BQ96JE7 1060 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 KIF2CQ99661 725 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 GMIPQ9P107 970 aa5.9□□□□□ -1.47
TRAPPC13-204ENST00000438419 WNT11O96014 354 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 CDCP2Q5VXM1 449 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 SPRED2Q7Z698 418 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 CNNM2Q9H8M5 875 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 GINM1Q9NU53 330 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 STRIP2Q9ULQ0 834 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 ZNRF3Q9ULT6 936 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 EFR3BQ9Y2G0 817 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 CAPN6Q9Y6Q1 641 aa5.89□□□□□ -1.47
TRAPPC13-204ENST00000438419 TMEM265A0A087WTH1 108 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 MEIS3P2A8K0S8 358 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 GNAT3A8MTJ3 354 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 RGS13O14921 159 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 UBOX5O94941 541 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 CBX7O95931 251 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 CD96P40200 585 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 LRRFIP1Q32MZ4 808 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 NAALADL2Q58DX5 795 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 ZNF746Q6NUN9 644 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 ZNF574Q6ZN55 896 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 ARHGAP27Q6ZUM4 889 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 VSIG10LQ86VR7 867 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 VWCEQ96DN2 955 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 CCDC74BQ96LY2 380 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 Q96M66 194 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 FERD3LQ96RJ6 166 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 PAK6Q9NQU5 681 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 PPT2Q9UMR5 302 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 SNX11Q9Y5W9 270 aa5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 OAS3Q9Y6K5 1087 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-204ENST00000438419 LRRN2O75325 713 aa5.87□□□□□ -1.47
TRAPPC13-204ENST00000438419 ATF4P18848 351 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-204ENST00000438419 POLR2BP30876 1174 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-204ENST00000438419 ETV3P41162 512 aa5.87□□□□□ -1.47
TRAPPC13-204ENST00000438419 NASPP49321 788 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-204ENST00000438419 ARID5AQ03989 594 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms