RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 AKAP17AQ02040 695 aaKnown RBP16.86■□□□□ 0.29
RFTN1-203ENST00000432519 RILPL1Q5EBL4 403 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 WDR66Q8TBY9 1149 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 TUBE1Q9UJT0 475 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 KRBA2Q6ZNG9 492 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.86■□□□□ 0.29
RFTN1-203ENST00000432519 STAG2Q8N3U4 1231 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 TIGD1Q96MW7 591 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 MTMR7Q9Y216 660 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 PCDHA5Q9Y5H7 936 aa16.86■□□□□ 0.29
RFTN1-203ENST00000432519 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
RFTN1-203ENST00000432519 FILIP1Q7Z7B0 1213 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 POLR2DO15514 142 aaKnown RBP16.85■□□□□ 0.29
RFTN1-203ENST00000432519 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
RFTN1-203ENST00000432519 ADRA2BP18089 450 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 MDM2Q00987 491 aaPredicted RBP16.85■□□□□ 0.29
RFTN1-203ENST00000432519 SLC35G1Q2M3R5 365 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 SPTY2D1Q68D10 685 aaPredicted RBP16.85■□□□□ 0.29
RFTN1-203ENST00000432519 CNNM3Q8NE01 707 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 MRFAP1L1Q96HT8 127 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 RTFDC1Q9BY42 306 aaPredicted RBP16.85■□□□□ 0.29
RFTN1-203ENST00000432519 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
RFTN1-203ENST00000432519 A0A087X0B3 334 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 DDAH1O94760 285 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
RFTN1-203ENST00000432519 PDE4BQ07343 736 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 ZNF804AQ7Z570 1209 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 TNFRSF25Q93038 417 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
RFTN1-203ENST00000432519 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
RFTN1-203ENST00000432519 ZRSR1Q15695 479 aaKnown RBP16.84■□□□□ 0.29
RFTN1-203ENST00000432519 PTPN21Q16825 1174 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 SERTAD1Q9UHV2 236 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 BRWD3Q6RI45 1802 aa16.84■□□□□ 0.29
RFTN1-203ENST00000432519 UQCRHLA0A096LP55 91 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 UQCRHP07919 91 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 CDC25BP30305 580 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 KRT2P35908 639 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 PPP2R5BQ15173 497 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 ZNF827Q17R98 1081 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.29
RFTN1-203ENST00000432519 EPSTI1Q96J88 318 aa16.83■□□□□ 0.29
RFTN1-203ENST00000432519 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.29
RFTN1-203ENST00000432519 TBC1D16Q8TBP0 767 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 TSC1Q92574 1164 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 XPO4Q9C0E2 1151 aaKnown RBP16.83■□□□□ 0.28
RFTN1-203ENST00000432519 SRPRBQ9Y5M8 271 aaKnown RBP16.83■□□□□ 0.28
RFTN1-203ENST00000432519 BTDP43251 543 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 ST5P78524 1137 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 ZNF174Q15697 407 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.28
RFTN1-203ENST00000432519 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 IFNKQ9P0W0 207 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 GGA1Q9UJY5 639 aa16.83■□□□□ 0.28
RFTN1-203ENST00000432519 TPM3P06753 285 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 CALM1P0DP23 149 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 CALM2P0DP24 149 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 CALM3P0DP25 149 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 CASP1P29466 404 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 TYW1BQ6NUM6 668 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 LRRC8AQ8IWT6 810 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 BPIFA3Q9BQP9 254 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 HSP90AA4PQ58FG1 418 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
RFTN1-203ENST00000432519 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 PNMA1Q8ND90 353 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 MKNK2Q9HBH9 465 aa16.82■□□□□ 0.28
RFTN1-203ENST00000432519 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 IL1R1P14778 569 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 PPP4CP60510 307 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 TXNRD1Q16881 649 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 DPF2Q92785 391 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 TRIM75PA6NK02 468 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 TPM2P07951 284 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 SCG2P13521 617 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 RASGRP4Q8TDF6 673 aa16.81■□□□□ 0.28
RFTN1-203ENST00000432519 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
RFTN1-203ENST00000432519 USP27XA6NNY8 438 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 ACTN4O43707 911 aaKnown RBP16.8■□□□□ 0.28
RFTN1-203ENST00000432519 CYTH3O43739 400 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 SMC2O95347 1197 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 RASA1P20936 1047 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 PIK3AP1Q6ZUJ8 805 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 MXD3Q9BW11 206 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 BAG3O95817 575 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 GOLGA8HP0CJ92 632 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 XBP1P17861 261 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 RHBDL3P58872 404 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
RFTN1-203ENST00000432519 ZBTB22O15209 634 aa16.79■□□□□ 0.28
RFTN1-203ENST00000432519 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms