RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
PTCH1-208ENST00000430669 GYG1P46976 350 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 LARGE2Q8N3Y3 721 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-208ENST00000430669 CUEDC2Q9H467 287 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
PTCH1-208ENST00000430669 A0A1W2PQ27 194 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 A0A1W2PQ64 194 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 A0A1W2PQD8 194 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 CYP26C1Q6V0L0 522 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 NRXN3Q9Y4C0 1643 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 CMA1P23946 247 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 USP17L12C9JPN9 530 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 USP17L21D6R901 530 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 H0YHG0 523 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 CCDC17Q96LX7 622 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 SCG2P13521 617 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 BAG6P46379 1132 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
PTCH1-208ENST00000430669 CCDC42Q96M95 316 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
PTCH1-208ENST00000430669 MYL1P05976 194 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 TNKSO95271 1327 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 KIF4AO95239 1232 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 ZNF75DP51815 510 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 EDC3Q96F86 508 aaKnown RBP12.94□□□□□ -0.34
PTCH1-208ENST00000430669 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
PTCH1-208ENST00000430669 LONP1P36776 959 aaKnown RBP12.94□□□□□ -0.34
PTCH1-208ENST00000430669 LIFRP42702 1097 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 CLUL1Q15846 466 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 BLIDQ8IZY5 108 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 AK8Q96MA6 479 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 EXOC7Q9UPT5 735 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 PLS1Q14651 629 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 BBXQ8WY36 941 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-208ENST00000430669 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 IGKV5-2P06315 115 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 TTLL11Q8NHH1 800 aa12.94□□□□□ -0.34
PTCH1-208ENST00000430669 SASH1O94885 1247 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 ERFEQ4G0M1 354 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 CBX8Q9HC52 389 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
PTCH1-208ENST00000430669 AS3MTQ9HBK9 375 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 JCADQ9P266 1359 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 MYH8P13535 1937 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 NPR1P16066 1061 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 CDC25BP30305 580 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 FAM107BQ9H098 131 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 CENPHQ9H3R5 247 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 ARFGAP3Q9NP61 516 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 ZNF589Q86UQ0 364 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-208ENST00000430669 MSANTD4Q8NCY6 345 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 CC2D2BQ6DHV5 1058 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 UTYO14607 1347 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 ANTXR1Q9H6X2 564 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 DNM3Q9UQ16 869 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 NR1I2O75469 434 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-208ENST00000430669 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 VPS54Q9P1Q0 977 aa12.93□□□□□ -0.34
PTCH1-208ENST00000430669 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 TTLL1O95922 423 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 NEFHP12036 1026 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 GRAPQ13588 217 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-208ENST00000430669 KIFAP3Q92845 792 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CCDC51Q96ER9 411 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 ISCA1Q9BUE6 129 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
PTCH1-208ENST00000430669 DCAF15Q66K64 600 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CCDC84Q86UT8 332 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-208ENST00000430669 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CYP21A2P08686 494 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 GTF2IP78347 998 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 PDE4DQ08499 809 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 KRT26Q7Z3Y9 468 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CEP83Q9Y592 693 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CTAGE15A4D2H0 777 aa12.92□□□□□ -0.34
PTCH1-208ENST00000430669 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-208ENST00000430669 CTAGE8P0CG41 777 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms