RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FSD1Q9BTV5 496 aa21.11■□□□□ 0.97
NUP50-208ENST00000430547 KIAA1683Q9H0B3 1180 aa21.11■□□□□ 0.97
NUP50-208ENST00000430547 EMILIN3Q9NT22 766 aa21.11■□□□□ 0.97
NUP50-208ENST00000430547 ARPP21Q9UBL0 812 aaPredicted RBP21.11■□□□□ 0.97
NUP50-208ENST00000430547 PDE4DIPQ5VU43 2346 aa21.11■□□□□ 0.97
NUP50-208ENST00000430547 HERVK_113P62684 666 aa21.1■□□□□ 0.97
NUP50-208ENST00000430547 C12orf60Q5U649 245 aa21.1■□□□□ 0.97
NUP50-208ENST00000430547 TMEM179Q6ZVK1 233 aa21.1■□□□□ 0.97
NUP50-208ENST00000430547 PI4K2BQ8TCG2 481 aa21.1■□□□□ 0.97
NUP50-208ENST00000430547 GTF3C2Q8WUA4 911 aaPredicted RBP21.1■□□□□ 0.97
NUP50-208ENST00000430547 C12orf42Q96LP6 360 aa21.1■□□□□ 0.97
NUP50-208ENST00000430547 GABRQQ9UN88 632 aa21.1■□□□□ 0.97
NUP50-208ENST00000430547 CYP2D7A0A087X1C5 515 aa21.09■□□□□ 0.97
NUP50-208ENST00000430547 FLT3LGP49771 235 aa21.09■□□□□ 0.97
NUP50-208ENST00000430547 UBXN2AP68543 259 aa21.09■□□□□ 0.97
NUP50-208ENST00000430547 SLAIN1Q8ND83 568 aa21.09■□□□□ 0.97
NUP50-208ENST00000430547 STRBPQ96SI9 672 aaKnown RBP21.09■□□□□ 0.97
NUP50-208ENST00000430547 P2RX7Q99572 595 aaKnown RBP21.09■□□□□ 0.97
NUP50-208ENST00000430547 USP17L15C9J2P7 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L13C9JLJ4 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L11C9JVI0 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L18D6R9N7 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L22D6RA61 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L17D6RBQ6 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L19D6RCP7 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L20D6RJB6 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 GNAT2P19087 354 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 USP17L24Q0WX57 530 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 CCAR1Q8IX12 1150 aaKnown RBP21.08■□□□□ 0.97
NUP50-208ENST00000430547 ACER1Q8TDN7 264 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 OSBP2Q969R2 916 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 CCDC17Q96LX7 622 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.97
NUP50-208ENST00000430547 MORF4L1Q9UBU8 362 aa21.08■□□□□ 0.97
NUP50-208ENST00000430547 GPAA1O43292 621 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 ADCY3O60266 1144 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 VCAM1P19320 739 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 GUCY1A2P33402 732 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 CDK8P49336 464 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 CTR9Q6PD62 1173 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 C16orf86Q6ZW13 317 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 GPRC5AQ8NFJ5 357 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 PAGR1Q9BTK6 254 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 ARHGEF10LQ9HCE6 1279 aa21.07■□□□□ 0.96
NUP50-208ENST00000430547 APPP05067 770 aa21.06■□□□□ 0.96
NUP50-208ENST00000430547 EN2P19622 333 aaPredicted RBP21.06■□□□□ 0.96
NUP50-208ENST00000430547 TDO2P48775 406 aa21.06■□□□□ 0.96
NUP50-208ENST00000430547 IRF5Q13568 498 aa21.06■□□□□ 0.96
NUP50-208ENST00000430547 SH2D4AQ9H788 454 aa21.06■□□□□ 0.96
NUP50-208ENST00000430547 GSG1L2A8MUP6 293 aa21.05■□□□□ 0.96
NUP50-208ENST00000430547 M0R2C6 588 aa21.05■□□□□ 0.96
NUP50-208ENST00000430547 AKR1B1P15121 316 aa21.05■□□□□ 0.96
NUP50-208ENST00000430547 ICA1Q05084 483 aa21.05■□□□□ 0.96
NUP50-208ENST00000430547 RPAP3Q9H6T3 665 aaPredicted RBP21.05■□□□□ 0.96
NUP50-208ENST00000430547 CWC22Q9HCG8 908 aaKnown RBP21.05■□□□□ 0.96
NUP50-208ENST00000430547 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 ERVK-9P63128 1117 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 ERVK-24P63145 666 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 MTFR1Q15390 333 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 SBK1Q52WX2 424 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 CATSPERGQ6ZRH7 1159 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 PXYLP1Q8TE99 480 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 NACAP1Q9BZK3 213 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 TXNRD2Q9NNW7 524 aa21.04■□□□□ 0.96
NUP50-208ENST00000430547 BRCA2P51587 3418 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 SMIM22K7EJ46 135 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 ELNP15502 786 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 MAPK4P31152 587 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 NKX2-3Q8TAU0 364 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 TANGO6Q9C0B7 1094 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 RNF208Q9H0X6 261 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 MKNK2Q9HBH9 465 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 RBPJLQ9UBG7 517 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 PLXNB2O15031 1838 aa21.03■□□□□ 0.96
NUP50-208ENST00000430547 A0A1W2PRG0 241 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 CCL5P13501 91 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 PDE1AP54750 535 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 CCNA1P78396 465 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 ATP2B2Q01814 1243 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 CLEC10AQ8IUN9 316 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 STK11IPQ8N1F8 1099 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 EVI5LQ96CN4 794 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 ZNF287Q9HBT7 754 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 STAP2Q9UGK3 403 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 RABGAP1Q9Y3P9 1069 aa21.02■□□□□ 0.96
NUP50-208ENST00000430547 SUPT16HQ9Y5B9 1047 aaKnown RBP21.02■□□□□ 0.96
NUP50-208ENST00000430547 ROBO3Q96MS0 1386 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 PATL2C9JE40 543 aaKnown RBP21.01■□□□□ 0.95
NUP50-208ENST00000430547 PEX10O60683 326 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 INHAP05111 366 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 ZMYM1Q5SVZ6 1142 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 B4GALNT3Q6L9W6 998 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 SOCS4Q8WXH5 440 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 LPAR1Q92633 364 aa21.01■□□□□ 0.95
NUP50-208ENST00000430547 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
NUP50-208ENST00000430547 KANSL2Q9H9L4 492 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms