RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CYP2D7A0A087X1C5 515 aa20.71■□□□□ 0.91
CPSF4-203ENST00000430038 A0A1W2PRG0 241 aa20.71■□□□□ 0.91
CPSF4-203ENST00000430038 H0YGN5 161 aa20.71■□□□□ 0.91
CPSF4-203ENST00000430038 POLR3DP05423 398 aaPredicted RBP20.71■□□□□ 0.91
CPSF4-203ENST00000430038 SEPT2Q15019 361 aa20.71■□□□□ 0.91
CPSF4-203ENST00000430038 HABP4Q5JVS0 413 aaKnown RBP20.71■□□□□ 0.91
CPSF4-203ENST00000430038 USP17L2Q6R6M4 530 aa20.71■□□□□ 0.91
CPSF4-203ENST00000430038 C12orf42Q96LP6 360 aa20.71■□□□□ 0.91
CPSF4-203ENST00000430038 CRNKL1Q9BZJ0 848 aaKnown RBP20.71■□□□□ 0.91
CPSF4-203ENST00000430038 PAK6Q9NQU5 681 aaPredicted RBP20.71■□□□□ 0.91
CPSF4-203ENST00000430038 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
CPSF4-203ENST00000430038 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
CPSF4-203ENST00000430038 SIAH1Q8IUQ4 282 aa20.7■□□□□ 0.9
CPSF4-203ENST00000430038 DEFB118Q96PH6 123 aa20.7■□□□□ 0.9
CPSF4-203ENST00000430038 LRRCC1Q9C099 1032 aa20.7■□□□□ 0.9
CPSF4-203ENST00000430038 MBD4O95243 580 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 ERVK-9P63128 1117 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 ERVK-24P63145 666 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 CATSPERGQ6ZRH7 1159 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 GPRC5AQ8NFJ5 357 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 NKX2-3Q8TAU0 364 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 TRIB2Q92519 343 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 USP6NLQ92738 828 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 PAGR1Q9BTK6 254 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 KIAA1683Q9H0B3 1180 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 COLQQ9Y215 455 aaPredicted RBP20.69■□□□□ 0.9
CPSF4-203ENST00000430038 TRIOBPQ9H2D6 2365 aa20.69■□□□□ 0.9
CPSF4-203ENST00000430038 VCAM1P19320 739 aa20.68■□□□□ 0.9
CPSF4-203ENST00000430038 CYP2B6P20813 491 aa20.68■□□□□ 0.9
CPSF4-203ENST00000430038 TSHZ3Q63HK5 1081 aa20.68■□□□□ 0.9
CPSF4-203ENST00000430038 CLEC10AQ8IUN9 316 aa20.68■□□□□ 0.9
CPSF4-203ENST00000430038 CRISPLD2Q9H0B8 497 aa20.68■□□□□ 0.9
CPSF4-203ENST00000430038 PUS7LQ9H0K6 701 aaKnown RBP20.68■□□□□ 0.9
CPSF4-203ENST00000430038 DCTPP1Q9H773 170 aa20.68■□□□□ 0.9
CPSF4-203ENST00000430038 CHMP4BQ9H444 224 aaKnown RBP20.67■□□□□ 0.9
CPSF4-203ENST00000430038 BTBD7Q9P203 1132 aa20.67■□□□□ 0.9
CPSF4-203ENST00000430038 PCDHB15Q9Y5E8 787 aa20.67■□□□□ 0.9
CPSF4-203ENST00000430038 SZT2Q5T011 3432 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L15C9J2P7 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L13C9JLJ4 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L11C9JVI0 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L18D6R9N7 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L22D6RA61 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L17D6RBQ6 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L19D6RCP7 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L20D6RJB6 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 TFRCP02786 760 aaKnown RBP20.66■□□□□ 0.9
CPSF4-203ENST00000430038 MNX1P50219 401 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L24Q0WX57 530 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 CCL14Q16627 93 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 DIS3LQ8TF46 1054 aaKnown RBP20.66■□□□□ 0.9
CPSF4-203ENST00000430038 FEZ1Q99689 392 aa20.66■□□□□ 0.9
CPSF4-203ENST00000430038 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.66■□□□□ 0.9
CPSF4-203ENST00000430038 PARP14Q460N5 1801 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 FARP2O94887 1054 aaPredicted RBP20.65■□□□□ 0.9
CPSF4-203ENST00000430038 HMGCRP04035 888 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 AKR1B1P15121 316 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 MORN1Q5T089 497 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 GPR142Q7Z601 462 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 DPF3Q92784 378 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 RPAP3Q9H6T3 665 aaPredicted RBP20.65■□□□□ 0.9
CPSF4-203ENST00000430038 CABP5Q9NP86 173 aa20.65■□□□□ 0.9
CPSF4-203ENST00000430038 USP17L12C9JPN9 530 aa20.64■□□□□ 0.89
CPSF4-203ENST00000430038 USP17L21D6R901 530 aa20.64■□□□□ 0.89
CPSF4-203ENST00000430038 MPHOSPH10O00566 681 aaKnown RBP20.64■□□□□ 0.89
CPSF4-203ENST00000430038 UBE3CQ15386 1083 aa20.64■□□□□ 0.89
CPSF4-203ENST00000430038 MAP3K21Q5TCX8 1036 aa20.64■□□□□ 0.89
CPSF4-203ENST00000430038 C12orf60Q5U649 245 aa20.64■□□□□ 0.89
CPSF4-203ENST00000430038 SPDYE16A6NNV3 312 aaPredicted RBP20.63■□□□□ 0.89
CPSF4-203ENST00000430038 USP14P54578 494 aa20.63■□□□□ 0.89
CPSF4-203ENST00000430038 GCC1Q96CN9 775 aa20.63■□□□□ 0.89
CPSF4-203ENST00000430038 PAWRQ96IZ0 340 aaKnown RBP20.63■□□□□ 0.89
CPSF4-203ENST00000430038 NUDT12Q9BQG2 462 aa20.63■□□□□ 0.89
CPSF4-203ENST00000430038 ATP8A2Q9NTI2 1148 aa20.63■□□□□ 0.89
CPSF4-203ENST00000430038 ECHDC1Q9NTX5 307 aa20.63■□□□□ 0.89
CPSF4-203ENST00000430038 RABGAP1Q9Y3P9 1069 aa20.63■□□□□ 0.89
CPSF4-203ENST00000430038 RPTORQ8N122 1335 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 XRCC5P13010 732 aaKnown RBP20.62■□□□□ 0.89
CPSF4-203ENST00000430038 MAPK4P31152 587 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 CDK8P49336 464 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 CTR9Q6PD62 1173 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 LBX2Q6XYB7 198 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 PLEKHH3Q7Z736 793 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 OTUD7AQ8TE49 926 aaPredicted RBP20.62■□□□□ 0.89
CPSF4-203ENST00000430038 FLRT1Q9NZU1 646 aa20.62■□□□□ 0.89
CPSF4-203ENST00000430038 ZNFX1Q9P2E3 1918 aaKnown RBP20.61■□□□□ 0.89
CPSF4-203ENST00000430038 FXR1P51114 621 aaKnown RBP eCLIP20.61■□□□□ 0.89
CPSF4-203ENST00000430038 CACNB2Q08289 660 aaPredicted RBP20.61■□□□□ 0.89
CPSF4-203ENST00000430038 OSBP2Q969R2 916 aa20.61■□□□□ 0.89
CPSF4-203ENST00000430038 STRBPQ96SI9 672 aaKnown RBP20.61■□□□□ 0.89
CPSF4-203ENST00000430038 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.61■□□□□ 0.89
CPSF4-203ENST00000430038 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
CPSF4-203ENST00000430038 COL11A1P12107 1806 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-203ENST00000430038 PRKAR2AP13861 404 aaKnown RBP20.6■□□□□ 0.89
CPSF4-203ENST00000430038 CCND3P30281 292 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-203ENST00000430038 CHRDL2Q6WN34 429 aa20.6■□□□□ 0.89
CPSF4-203ENST00000430038 C16orf86Q6ZW13 317 aa20.6■□□□□ 0.89
CPSF4-203ENST00000430038 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.6■□□□□ 0.89
CPSF4-203ENST00000430038 HMX1Q9NP08 348 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-203ENST00000430038 PCDH10Q9P2E7 1040 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms