RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 GAL3ST3Q96A11 431 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 ISL2Q96A47 359 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 ELMO3Q96BJ8 720 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 EPB41L4BQ9H329 900 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 SNCAIPQ9Y6H5 919 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 PITPNM2Q9BZ72 1349 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 FANCGO15287 622 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 GLDCP23378 1020 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 GBP2P32456 591 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 LMNB2Q03252 620 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 NKPD1Q17RQ9 610 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 TSNAXIP1Q2TAA8 658 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 MPRIPQ6WCQ1 1025 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 ERMP1Q7Z2K6 904 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 HDXQ7Z353 690 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 KCT2Q8NC54 265 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 PHC3Q8NDX5 983 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 MRRFQ96E11 262 aaKnown RBP4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 C20orf173Q96LM9 149 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 TMEM74Q96NL1 305 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 CARS2Q9HA77 564 aaKnown RBP4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 PARD6AQ9NPB6 346 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 PRDM10Q9NQV6 1147 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 PICK1Q9NRD5 415 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 TACC3Q9Y6A5 838 aa4.77□□□□□ -1.65
HMGB1P9-201ENST00000429856 DCDC2CA8MYV0 355 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 ETV2O00321 342 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 RECKO95980 971 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 RAC2P15153 192 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 ZNF76P36508 570 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 CAMK2GQ13555 558 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 SEPT6Q14141 434 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 RHOVQ96L33 236 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 SLC26A8Q96RN1 970 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 BACH2Q9BYV9 841 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 ZCCHC4Q9H5U6 513 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 GGT7Q9UJ14 662 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 TLR6Q9Y2C9 796 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 PCDHB5Q9Y5E4 795 aa4.76□□□□□ -1.65
HMGB1P9-201ENST00000429856 FAM155AB1AL88 458 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 SCAMP3O14828 347 aaKnown RBP4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 FOXD2O60548 495 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 BPNT1O95861 308 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 NEFMP07197 916 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 RPL6Q02878 288 aaKnown RBP4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 RING1Q06587 406 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 KRTAP1-1Q07627 177 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 WIPI1Q5MNZ9 446 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 ZBTB37Q5TC79 503 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 LRFN4Q6PJG9 635 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 ABHD4Q8TB40 342 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 ZNF507Q8TCN5 953 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 PLPPR2Q96GM1 343 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 IRF2BPLQ9H1B7 796 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 KBTBD4Q9NVX7 518 aa4.75□□□□□ -1.65
HMGB1P9-201ENST00000429856 PRAMEF27A3QJZ7 478 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 PF4P02776 101 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 LINC00310P59036 64 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 FANCCQ00597 558 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 PTPN11Q06124 597 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 PDE4BQ07343 736 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 INPP5AQ14642 412 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 PPM1JQ5JR12 505 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 SNAP47Q5SQN1 464 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 LDLRAD1Q5T700 205 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 CDC37L1Q7L3B6 337 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 C12orf40Q86WS4 652 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 GATAD2BQ8WXI9 593 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 RNF34Q969K3 372 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 FOXQ1Q9C009 403 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 WNT10AQ9GZT5 417 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 PRDM5Q9NQX1 630 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 KCNQ5Q9NR82 932 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 CSADQ9Y600 493 aa4.74□□□□□ -1.65
HMGB1P9-201ENST00000429856 MINDY4BA8MYZ0 360 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 BMP7P18075 431 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 EIF4A3P38919 411 aaKnown RBP4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 JARID2Q92833 1246 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 HSPA12BQ96MM6 686 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 KCNK12Q9HB15 430 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 ATP13A1Q9HD20 1204 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 C19orf73Q9NVV2 129 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 SUPT16HQ9Y5B9 1047 aaKnown RBP4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 ROBO2Q9HCK4 1378 aa4.73□□□□□ -1.65
HMGB1P9-201ENST00000429856 FAM221AA4D161 298 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 F6X3S4 739 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 GFRA2O00451 464 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 CILPO75339 1184 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 SRFP11831 508 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 SYN1P17600 705 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 NTF4P34130 210 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 ETF1P62495 437 aaKnown RBP4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 FAM160A1Q05DH4 1040 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 MPP2Q14168 576 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 BNC2Q6ZN30 1099 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 FAM196AQ6ZSG2 479 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 HID1Q8IV36 788 aa4.72□□□□□ -1.65
HMGB1P9-201ENST00000429856 GOLM1Q8NBJ4 401 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms