RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.69■■□□□ 1.7
VSX1-205ENST00000429762 MYH15Q9Y2K3 1946 aa25.69■■□□□ 1.7
VSX1-205ENST00000429762 TCP10L2B9ZVM9 353 aa25.68■■□□□ 1.7
VSX1-205ENST00000429762 FBXO18Q8NFZ0 1043 aa25.68■■□□□ 1.7
VSX1-205ENST00000429762 CEP95Q96GE4 821 aa25.68■■□□□ 1.7
VSX1-205ENST00000429762 TMEM47Q9BQJ4 181 aa25.68■■□□□ 1.7
VSX1-205ENST00000429762 FHDC1Q9C0D6 1143 aaPredicted RBP25.68■■□□□ 1.7
VSX1-205ENST00000429762 DNAJC18Q9H819 358 aa25.68■■□□□ 1.7
VSX1-205ENST00000429762 STK36Q9NRP7 1315 aa25.68■■□□□ 1.7
VSX1-205ENST00000429762 CALM1P0DP23 149 aa25.67■■□□□ 1.7
VSX1-205ENST00000429762 CALM2P0DP24 149 aa25.67■■□□□ 1.7
VSX1-205ENST00000429762 CALM3P0DP25 149 aa25.67■■□□□ 1.7
VSX1-205ENST00000429762 MYH6P13533 1939 aa25.67■■□□□ 1.7
VSX1-205ENST00000429762 SKOR2Q2VWA4 1001 aaPredicted RBP25.67■■□□□ 1.7
VSX1-205ENST00000429762 AGBL3Q8NEM8 1001 aa25.67■■□□□ 1.7
VSX1-205ENST00000429762 ANKS1AQ92625 1134 aa25.67■■□□□ 1.7
VSX1-205ENST00000429762 FUT2Q10981 343 aa25.66■■□□□ 1.7
VSX1-205ENST00000429762 TMTC3Q6ZXV5 915 aa25.66■■□□□ 1.7
VSX1-205ENST00000429762 ILDR2Q71H61 639 aa25.66■■□□□ 1.7
VSX1-205ENST00000429762 TRIM22Q8IYM9 498 aa25.66■■□□□ 1.7
VSX1-205ENST00000429762 CTCFLQ8NI51 663 aaPredicted RBP25.66■■□□□ 1.7
VSX1-205ENST00000429762 ZSCAN16Q9H4T2 348 aaPredicted RBP25.66■■□□□ 1.7
VSX1-205ENST00000429762 ZNF70Q9UC06 446 aaPredicted RBP25.66■■□□□ 1.7
VSX1-205ENST00000429762 KIF28PB7ZC32 967 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 NT5C2P49902 561 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 EIF6P56537 245 aaKnown RBP25.65■■□□□ 1.7
VSX1-205ENST00000429762 KRT85P78386 507 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 SHROOM1Q2M3G4 852 aaPredicted RBP25.65■■□□□ 1.7
VSX1-205ENST00000429762 KRT40Q6A162 431 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 SRBD1Q8N5C6 995 aaKnown RBP25.65■■□□□ 1.7
VSX1-205ENST00000429762 RBM28Q9NW13 759 aaKnown RBP25.65■■□□□ 1.7
VSX1-205ENST00000429762 SWAP70Q9UH65 585 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 LTBP3Q9NS15 1303 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 KLHL40Q2TBA0 621 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 CCDC178Q5BJE1 867 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 TMEM87AQ8NBN3 555 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 PIBF1Q8WXW3 757 aa25.65■■□□□ 1.7
VSX1-205ENST00000429762 FTOQ9C0B1 505 aaKnown RBP eCLIP25.65■■□□□ 1.7
VSX1-205ENST00000429762 RBM27Q9P2N5 1060 aaKnown RBP25.65■■□□□ 1.7
VSX1-205ENST00000429762 VEZTQ9HBM0 779 aa25.64■■□□□ 1.7
VSX1-205ENST00000429762 MPHOSPH10O00566 681 aaKnown RBP25.64■■□□□ 1.69
VSX1-205ENST00000429762 CEBPZQ03701 1054 aaKnown RBP25.64■■□□□ 1.69
VSX1-205ENST00000429762 STAG2Q8N3U4 1231 aa25.64■■□□□ 1.69
VSX1-205ENST00000429762 EHD4Q9H223 541 aa25.64■■□□□ 1.69
VSX1-205ENST00000429762 DHX36Q9H2U1 1008 aaKnown RBP25.64■■□□□ 1.69
VSX1-205ENST00000429762 TMOD2Q9NZR1 351 aa25.64■■□□□ 1.69
VSX1-205ENST00000429762 GJA3Q9Y6H8 435 aa25.64■■□□□ 1.69
VSX1-205ENST00000429762 UTRNP46939 3433 aa25.63■■□□□ 1.69
VSX1-205ENST00000429762 CNTNAP5Q8WYK1 1306 aa25.63■■□□□ 1.69
VSX1-205ENST00000429762 TNIP1Q15025 636 aa25.63■■□□□ 1.69
VSX1-205ENST00000429762 PI4KBQ9UBF8 816 aa25.63■■□□□ 1.69
VSX1-205ENST00000429762 KCNJ14Q9UNX9 436 aa25.63■■□□□ 1.69
VSX1-205ENST00000429762 SCAF8Q9UPN6 1271 aaKnown RBP25.63■■□□□ 1.69
VSX1-205ENST00000429762 ENTPD3O75355 529 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 DEXIO95424 95 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 KIF23Q02241 960 aaPredicted RBP25.62■■□□□ 1.69
VSX1-205ENST00000429762 PPP2R5BQ15173 497 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 V9GY48 417 aaPredicted RBP25.62■■□□□ 1.69
VSX1-205ENST00000429762 PLIN4Q96Q06 1357 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 BAZ2BQ9UIF8 2168 aaKnown RBP25.62■■□□□ 1.69
VSX1-205ENST00000429762 NPM3O75607 178 aaKnown RBP25.62■■□□□ 1.69
VSX1-205ENST00000429762 EGFRP00533 1210 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 GSE1Q14687 1217 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 GRM4Q14833 912 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 NBPF9Q3BBW0 867 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 SPDYE2Q495Y8 402 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 RBM26Q5T8P6 1007 aaKnown RBP25.62■■□□□ 1.69
VSX1-205ENST00000429762 CAVIN1Q6NZI2 390 aaKnown RBP25.62■■□□□ 1.69
VSX1-205ENST00000429762 ARHGAP27Q6ZUM4 889 aa25.62■■□□□ 1.69
VSX1-205ENST00000429762 ZNF541Q9H0D2 1346 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 GOLGA8HP0CJ92 632 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 TRIM29Q14134 588 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 PKN1Q16512 942 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 LRRC47Q8N1G4 583 aaKnown RBP25.61■■□□□ 1.69
VSX1-205ENST00000429762 WASF1Q92558 559 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 SHISA4Q96DD7 197 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 RNF26Q9BY78 433 aaPredicted RBP25.61■■□□□ 1.69
VSX1-205ENST00000429762 TRIM34Q9BYJ4 488 aa25.61■■□□□ 1.69
VSX1-205ENST00000429762 IGKV6D-41A0A0C4DH26 115 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 GMPSP49915 693 aaPredicted RBP25.6■■□□□ 1.69
VSX1-205ENST00000429762 AKAP17AQ02040 695 aaKnown RBP25.6■■□□□ 1.69
VSX1-205ENST00000429762 MYOZ2Q9NPC6 264 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 MTMR4Q9NYA4 1195 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 MAD2L2Q9UI95 211 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 CNTNAP1P78357 1384 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 CDAN1Q8IWY9 1227 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 CSRNP1Q96S65 589 aa25.6■■□□□ 1.69
VSX1-205ENST00000429762 PRPF3O43395 683 aaKnown RBP25.59■■□□□ 1.69
VSX1-205ENST00000429762 TOP1P11387 765 aaKnown RBP25.59■■□□□ 1.69
VSX1-205ENST00000429762 LEO1Q8WVC0 666 aaPredicted RBP25.59■■□□□ 1.69
VSX1-205ENST00000429762 SPATA32Q96LK8 384 aa25.59■■□□□ 1.69
VSX1-205ENST00000429762 USP28Q96RU2 1077 aa25.59■■□□□ 1.69
VSX1-205ENST00000429762 CPVLQ9H3G5 476 aa25.59■■□□□ 1.69
VSX1-205ENST00000429762 GREB1LQ9C091 1923 aaPredicted RBP25.59■■□□□ 1.69
VSX1-205ENST00000429762 ATRNL1Q5VV63 1379 aa25.59■■□□□ 1.69
VSX1-205ENST00000429762 FZD9O00144 591 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 KIF5BP33176 963 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 ATP2B2Q01814 1243 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 SLC35G1Q2M3R5 365 aa25.58■■□□□ 1.69
VSX1-205ENST00000429762 ZBED3Q96IU2 234 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms