RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 FAM227BQ96M60 508 aa20.59■□□□□ 0.89
LMCD1-204ENST00000426878 EFCC1Q9HA90 598 aa20.59■□□□□ 0.89
LMCD1-204ENST00000426878 HTTP42858 3142 aa20.58■□□□□ 0.89
LMCD1-204ENST00000426878 MINDY4BA8MYZ0 360 aa20.58■□□□□ 0.88
LMCD1-204ENST00000426878 SDSP20132 328 aa20.58■□□□□ 0.88
LMCD1-204ENST00000426878 CAP1Q01518 475 aa20.58■□□□□ 0.88
LMCD1-204ENST00000426878 ACER1Q8TDN7 264 aa20.58■□□□□ 0.88
LMCD1-204ENST00000426878 NAPBQ9H115 298 aa20.58■□□□□ 0.88
LMCD1-204ENST00000426878 TRIM17Q9Y577 477 aa20.58■□□□□ 0.88
LMCD1-204ENST00000426878 A0A0D9SFI3 127 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 GNRH1P01148 92 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 AKR1B1P15121 316 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 OSBPP22059 807 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
LMCD1-204ENST00000426878 KIF22Q14807 665 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 ALX1Q15699 326 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 CCDC129Q6ZRS4 1044 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 SMCR8Q8TEV9 937 aaPredicted RBP20.57■□□□□ 0.88
LMCD1-204ENST00000426878 ASCC2Q9H1I8 757 aaPredicted RBP20.57■□□□□ 0.88
LMCD1-204ENST00000426878 ZNF287Q9HBT7 754 aa20.57■□□□□ 0.88
LMCD1-204ENST00000426878 HIP1O00291 1037 aa20.56■□□□□ 0.88
LMCD1-204ENST00000426878 GCLCP48506 637 aaPredicted RBP20.56■□□□□ 0.88
LMCD1-204ENST00000426878 FEZ1Q99689 392 aa20.56■□□□□ 0.88
LMCD1-204ENST00000426878 TTC22Q5TAA0 569 aa20.55■□□□□ 0.88
LMCD1-204ENST00000426878 SIAH1Q8IUQ4 282 aa20.55■□□□□ 0.88
LMCD1-204ENST00000426878 MKNK2Q9HBH9 465 aa20.55■□□□□ 0.88
LMCD1-204ENST00000426878 HPS5Q9UPZ3 1129 aa20.55■□□□□ 0.88
LMCD1-204ENST00000426878 A0A1W2PRG0 241 aa20.54■□□□□ 0.88
LMCD1-204ENST00000426878 RASA1P20936 1047 aa20.54■□□□□ 0.88
LMCD1-204ENST00000426878 VPS53Q5VIR6 699 aa20.54■□□□□ 0.88
LMCD1-204ENST00000426878 KANSL2Q9H9L4 492 aa20.54■□□□□ 0.88
LMCD1-204ENST00000426878 PTPN22Q9Y2R2 807 aa20.54■□□□□ 0.88
LMCD1-204ENST00000426878 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 SLC3A2P08195 630 aaKnown RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 GSPT1P15170 499 aaKnown RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 IRX3P78415 501 aaPredicted RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 ICA1Q05084 483 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 PPARAQ07869 468 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 FAM110CQ1W6H9 321 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 ZNF589Q86UQ0 364 aaPredicted RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 ARHGAP39Q9C0H5 1083 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 SH2D4AQ9H788 454 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 ANAPC4Q9UJX5 808 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 TMX2Q9Y320 296 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 GREB1LQ9C091 1923 aaPredicted RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L15C9J2P7 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L13C9JLJ4 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L11C9JVI0 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L18D6R9N7 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L22D6RA61 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L17D6RBQ6 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L19D6RCP7 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L20D6RJB6 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 VCAM1P19320 739 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 CTGFP29279 349 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 PSMC4P43686 418 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 PRMT2P55345 433 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 PDE4BQ07343 736 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 USP17L24Q0WX57 530 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 CENPQQ7L2Z9 268 aaPredicted RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 TRIM47Q96LD4 638 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 P2RX7Q99572 595 aaKnown RBP20.53■□□□□ 0.88
LMCD1-204ENST00000426878 DIAPH3Q9NSV4 1193 aa20.53■□□□□ 0.88
LMCD1-204ENST00000426878 FGAP02671 866 aa20.52■□□□□ 0.87
LMCD1-204ENST00000426878 HERVK_113P62684 666 aa20.52■□□□□ 0.87
LMCD1-204ENST00000426878 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.87
LMCD1-204ENST00000426878 GTF3C2Q8WUA4 911 aaPredicted RBP20.52■□□□□ 0.87
LMCD1-204ENST00000426878 LPAR1Q92633 364 aa20.52■□□□□ 0.87
LMCD1-204ENST00000426878 MORF4L1Q9UBU8 362 aa20.52■□□□□ 0.87
LMCD1-204ENST00000426878 CATSPERGQ6ZRH7 1159 aa20.51■□□□□ 0.87
LMCD1-204ENST00000426878 ZNF444Q8N0Y2 327 aaPredicted RBP20.51■□□□□ 0.87
LMCD1-204ENST00000426878 ANKRD13CQ8N6S4 541 aa20.51■□□□□ 0.87
LMCD1-204ENST00000426878 CENPFP49454 3210 aa20.51■□□□□ 0.87
LMCD1-204ENST00000426878 IGKV6D-41A0A0C4DH26 115 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 CCDC85CA6NKD9 419 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 CAPN15O75808 1086 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 EEF2P13639 858 aaKnown RBP20.5■□□□□ 0.87
LMCD1-204ENST00000426878 HOXD10P28358 340 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 FCGRTP55899 365 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
LMCD1-204ENST00000426878 CLEC10AQ8IUN9 316 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 STK11IPQ8N1F8 1099 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
LMCD1-204ENST00000426878 ZSWIM8A7E2V4 1837 aa20.5■□□□□ 0.87
LMCD1-204ENST00000426878 FMNL1O95466 1100 aaPredicted RBP20.49■□□□□ 0.87
LMCD1-204ENST00000426878 FGRP09769 529 aa20.49■□□□□ 0.87
LMCD1-204ENST00000426878 LBX2Q6XYB7 198 aa20.49■□□□□ 0.87
LMCD1-204ENST00000426878 VCPKMTQ9H867 229 aa20.49■□□□□ 0.87
LMCD1-204ENST00000426878 NYAP2Q9P242 653 aa20.49■□□□□ 0.87
LMCD1-204ENST00000426878 SRRDQ9UH36 339 aa20.49■□□□□ 0.87
LMCD1-204ENST00000426878 MGAMO43451 1857 aa20.49■□□□□ 0.87
LMCD1-204ENST00000426878 PLIN4Q96Q06 1357 aa20.48■□□□□ 0.87
LMCD1-204ENST00000426878 PRDM1O75626 825 aa20.48■□□□□ 0.87
LMCD1-204ENST00000426878 RPAP3Q9H6T3 665 aaPredicted RBP20.48■□□□□ 0.87
LMCD1-204ENST00000426878 RBPJLQ9UBG7 517 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms