RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 L1TD1Q5T7N2 865 aaKnown RBP16.72■□□□□ 0.27
CDK3-201ENST00000425876 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
CDK3-201ENST00000425876 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 DHX36Q9H2U1 1008 aaKnown RBP16.72■□□□□ 0.27
CDK3-201ENST00000425876 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 HLA-DOAP06340 250 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 U2AF2P26368 475 aaKnown RBP eCLIP16.71■□□□□ 0.27
CDK3-201ENST00000425876 GNAQP50148 359 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
CDK3-201ENST00000425876 PNMA1Q8ND90 353 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 GMLQ99445 158 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
CDK3-201ENST00000425876 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
CDK3-201ENST00000425876 SERPINB13Q9UIV8 391 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 ECM29Q5VYK3 1845 aa16.71■□□□□ 0.27
CDK3-201ENST00000425876 MYSM1Q5VVJ2 828 aa16.7■□□□□ 0.26
CDK3-201ENST00000425876 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
CDK3-201ENST00000425876 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
CDK3-201ENST00000425876 RTEL1Q9NZ71 1219 aa16.7■□□□□ 0.26
CDK3-201ENST00000425876 ZNRF3Q9ULT6 936 aa16.7■□□□□ 0.26
CDK3-201ENST00000425876 ADAMTSL1Q8N6G6 1762 aa16.7■□□□□ 0.26
CDK3-201ENST00000425876 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDK3-201ENST00000425876 XBP1P17861 261 aa16.69■□□□□ 0.26
CDK3-201ENST00000425876 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
CDK3-201ENST00000425876 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDK3-201ENST00000425876 GRM4Q14833 912 aa16.69■□□□□ 0.26
CDK3-201ENST00000425876 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDK3-201ENST00000425876 NIM1KQ8IY84 436 aa16.69■□□□□ 0.26
CDK3-201ENST00000425876 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
CDK3-201ENST00000425876 CNTNAP5Q8WYK1 1306 aa16.69■□□□□ 0.26
CDK3-201ENST00000425876 GOLGA6L4A6NEF3 574 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 KIF28PB7ZC32 967 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 YEATS4O95619 227 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 MMP1P03956 469 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 NFIAQ12857 509 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 CFAP100Q494V2 611 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 CCDC183Q5T5S1 534 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 TMEM47Q9BQJ4 181 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 IGKV6D-41A0A0C4DH26 115 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 PSMD14O00487 310 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 ENTPD3O75355 529 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 TOP1P11387 765 aaKnown RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 MMP14P50281 582 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 PKN1Q16512 942 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 CCDC82Q8N4S0 544 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 SRBD1Q8N5C6 995 aaKnown RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 AGBL3Q8NEM8 1001 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 CCDC17Q96LX7 622 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 LZTS2Q9BRK4 669 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
CDK3-201ENST00000425876 STX8Q9UNK0 236 aa16.68■□□□□ 0.26
CDK3-201ENST00000425876 COL4A5P29400 1685 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 UBE2Q2LH0YL09 131 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 MRE11P49959 708 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 GPR162Q16538 588 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
CDK3-201ENST00000425876 PGBD1Q96JS3 809 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDK3-201ENST00000425876 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
CDK3-201ENST00000425876 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
CDK3-201ENST00000425876 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 FER1L6Q2WGJ9 1857 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 RAD17O75943 681 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 SHMT1P34896 483 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 GNL2Q13823 731 aaKnown RBP16.66■□□□□ 0.26
CDK3-201ENST00000425876 GAS2L3Q86XJ1 694 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
CDK3-201ENST00000425876 MTMR14Q8NCE2 650 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 LINC00301Q8NCQ3 95 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
CDK3-201ENST00000425876 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
CDK3-201ENST00000425876 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 SMARCA1P28370 1054 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 LRSAM1Q6UWE0 723 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
CDK3-201ENST00000425876 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
CDK3-201ENST00000425876 OGFOD1Q8N543 542 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 PRMT6Q96LA8 375 aaPredicted RBP16.65■□□□□ 0.26
CDK3-201ENST00000425876 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 MYH6P13533 1939 aa16.65■□□□□ 0.26
CDK3-201ENST00000425876 AKR1B1P15121 316 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 YY1P25490 414 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
CDK3-201ENST00000425876 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
CDK3-201ENST00000425876 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms