RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
NUP50-206ENST00000422489 LAMB1P07942 1786 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 USP17L21D6R901 530 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 TFRCP02786 760 aaKnown RBP11.18□□□□□ -0.62
NUP50-206ENST00000422489 INHAP05111 366 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 IRF5Q13568 498 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 SLC44A5Q8NCS7 719 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 PXYLP1Q8TE99 480 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 PUS7LQ9H0K6 701 aaKnown RBP11.18□□□□□ -0.62
NUP50-206ENST00000422489 TXNRD2Q9NNW7 524 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
NUP50-206ENST00000422489 GJB1P08034 283 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 CYP2B6P20813 491 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 ATP2B2Q01814 1243 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 GABPAQ06546 454 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 WDR78Q5VTH9 848 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 STK11IPQ8N1F8 1099 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 DPF3Q92784 378 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 KIAA1683Q9H0B3 1180 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
NUP50-206ENST00000422489 A0A1W2PRG0 241 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 SMIM22K7EJ46 135 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 RNF113AO15541 343 aaKnown RBP11.16□□□□□ -0.62
NUP50-206ENST00000422489 SGPL1O95470 568 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 APPP05067 770 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 AKR1B1P15121 316 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 GJA8P48165 433 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 CDK8P49336 464 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 ERVK-9P63128 1117 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 ERVK-24P63145 666 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 ANKRD45Q5TZF3 282 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 KBTBD3Q8NAB2 608 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 U2AF1L4Q8WU68 220 aaKnown RBP11.16□□□□□ -0.62
NUP50-206ENST00000422489 GTF3C2Q8WUA4 911 aaPredicted RBP11.16□□□□□ -0.62
NUP50-206ENST00000422489 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 DEFB118Q96PH6 123 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
NUP50-206ENST00000422489 GJD2Q9UKL4 321 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 DOCK1Q14185 1865 aa11.16□□□□□ -0.62
NUP50-206ENST00000422489 ZSWIM8A7E2V4 1837 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 ERC2O15083 957 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 RAD21O60216 631 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 ABCB7O75027 752 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 VCAM1P19320 739 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 MAPK4P31152 587 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 LRRFIP1Q32MZ4 808 aaKnown RBP11.15□□□□□ -0.62
NUP50-206ENST00000422489 CTR9Q6PD62 1173 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 TMEM179Q6ZVK1 233 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 PLEKHH3Q7Z736 793 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 OTUD7AQ8TE49 926 aaPredicted RBP11.15□□□□□ -0.62
NUP50-206ENST00000422489 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
NUP50-206ENST00000422489 ARHGEF10LQ9HCE6 1279 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 RABGAP1Q9Y3P9 1069 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 MAST2Q6P0Q8 1798 aa11.15□□□□□ -0.62
NUP50-206ENST00000422489 GLRX3O76003 335 aaKnown RBP11.14□□□□□ -0.63
NUP50-206ENST00000422489 ZFYP08048 801 aaPredicted RBP11.14□□□□□ -0.63
NUP50-206ENST00000422489 CCNA1P78396 465 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 TRIM32Q13049 653 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 COG2Q14746 738 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 CLEC10AQ8IUN9 316 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 APPBP2Q92624 585 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 OSBP2Q969R2 916 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 TANGO6Q9C0B7 1094 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 PORCNQ9H237 461 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 MKNK2Q9HBH9 465 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
NUP50-206ENST00000422489 TTC41PQ6P2S7 1318 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 CNMDO75829 334 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 HMGCRP04035 888 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 TDO2P48775 406 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 ICA1Q05084 483 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 SIAH1Q8IUQ4 282 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 SPICE1Q8N0Z3 855 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 FSD1Q9BTV5 496 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
NUP50-206ENST00000422489 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
NUP50-206ENST00000422489 BTBD7Q9P203 1132 aa11.13□□□□□ -0.63
NUP50-206ENST00000422489 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
NUP50-206ENST00000422489 M0R2C6 588 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 GPAA1O43292 621 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
NUP50-206ENST00000422489 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
NUP50-206ENST00000422489 MX1P20591 662 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 RGS2P41220 211 aa11.12□□□□□ -0.63
NUP50-206ENST00000422489 PLS1Q14651 629 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms