RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PSMB7Q99436 277 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 GNL3LQ9NVN8 582 aaKnown RBP18.79■□□□□ 0.6
PKP4-204ENST00000421462 ERLIN2O94905 339 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 CABP4P57796 275 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 UBXN1Q04323 297 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 TMTC1Q8IUR5 882 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 BAZ2BQ9UIF8 2168 aaKnown RBP18.78■□□□□ 0.6
PKP4-204ENST00000421462 PRDM1O75626 825 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 LY9Q9HBG7 655 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 JADE2Q9NQC1 790 aa18.78■□□□□ 0.6
PKP4-204ENST00000421462 GOLGA6CA6NDK9 693 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 NBPF26B4DH59 902 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 GOLGA6DP0CG33 693 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 ERCC5P28715 1186 aaPredicted RBP18.77■□□□□ 0.6
PKP4-204ENST00000421462 NBPF14Q5TI25 921 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 NBPF10Q6P3W6 841 aaKnown RBP18.77■□□□□ 0.6
PKP4-204ENST00000421462 CYP26C1Q6V0L0 522 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 KIAA1328Q86T90 577 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 NBPF15Q8N660 670 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 BCAS4Q8TDM0 211 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 IGDCC4Q8TDY8 1250 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.6
PKP4-204ENST00000421462 GOLGA6AQ9NYA3 693 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 MACROD2A1Z1Q3 448 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 EXOC5O00471 708 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 MCAMP43121 646 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 ZNF174Q15697 407 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 EFCAB13Q8IY85 973 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 FAM76AQ8TAV0 307 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 PAGE5Q96GU1 130 aa18.77■□□□□ 0.6
PKP4-204ENST00000421462 EPN1Q9Y6I3 576 aaPredicted RBP18.77■□□□□ 0.6
PKP4-204ENST00000421462 RPS6KA5O75582 802 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 USP14P54578 494 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 C2orf54Q08AI8 447 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 RILPL1Q5EBL4 403 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 METTL24Q5JXM2 366 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 AIDAQ96BJ3 306 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.77■□□□□ 0.594e-6■□□□□ 11.2
PKP4-204ENST00000421462 VPS54Q9P1Q0 977 aa18.77■□□□□ 0.59
PKP4-204ENST00000421462 ZNF532Q9HCE3 1301 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 PHKG2P15735 406 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
PKP4-204ENST00000421462 KAT2BQ92831 832 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 CTAGE1Q96RT6 745 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 SAR1BQ9Y6B6 198 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 EBAG9O00559 213 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 RTN1Q16799 776 aa18.76■□□□□ 0.59
PKP4-204ENST00000421462 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
PKP4-204ENST00000421462 AFDNP55196 1824 aaKnown RBP18.76■□□□□ 0.59
PKP4-204ENST00000421462 MAP9Q49MG5 647 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 NT5DC1Q5TFE4 455 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 KANK3Q6NY19 840 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 TRIML1Q8N9V2 468 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 SELENOOQ9BVL4 669 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 GPR108Q9NPR9 543 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 FAM169AQ9Y6X4 670 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 PRPF6O94906 941 aaKnown RBP18.75■□□□□ 0.59
PKP4-204ENST00000421462 PPARAQ07869 468 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 CUL4BQ13620 913 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 SND1Q7KZF4 910 aaKnown RBP eCLIP18.75■□□□□ 0.599e-9■□□□□ 8.6
PKP4-204ENST00000421462 HELBQ8NG08 1087 aaPredicted RBP18.75■□□□□ 0.59
PKP4-204ENST00000421462 COG1Q8WTW3 980 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 NAPBQ9H115 298 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 SRPRBQ9Y5M8 271 aaKnown RBP18.75■□□□□ 0.59
PKP4-204ENST00000421462 DUSP10Q9Y6W6 482 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 CDHR2Q9BYE9 1310 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 UBR1Q8IWV7 1749 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 GOLGA6BA6NDN3 693 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 NDUFA10O95299 355 aa18.75■□□□□ 0.59
PKP4-204ENST00000421462 EARS2Q5JPH6 523 aaKnown RBP18.75■□□□□ 0.59
PKP4-204ENST00000421462 MYCBPQ99417 103 aaPredicted RBP18.75■□□□□ 0.59
PKP4-204ENST00000421462 PIH1D3Q9NQM4 214 aaKnown RBP18.75■□□□□ 0.59
PKP4-204ENST00000421462 A0A087WUV0 522 aaPredicted RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 PBX1P40424 430 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 GNGT1P63211 74 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 AMPD2Q01433 879 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 SLC7A5Q01650 507 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 PCMTD1Q96MG8 357 aaPredicted RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 REXO2Q9Y3B8 237 aaKnown RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 PPP1R3GB7ZBB8 358 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 H0YHG0 523 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 WNT7AO00755 349 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 FMNL1O95466 1100 aaPredicted RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 COPB1P53618 953 aaKnown RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 CYP27A1Q02318 531 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 TSR1Q2NL82 804 aaKnown RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 MMS22LQ6ZRQ5 1243 aa18.74■□□□□ 0.59
PKP4-204ENST00000421462 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
PKP4-204ENST00000421462 TRIM49BA6NDI0 452 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 TUBB2AQ13885 445 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 TUBB2BQ9BVA1 445 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 TTC26A0AVF1 554 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 TRIM75PA6NK02 468 aa18.73■□□□□ 0.59
PKP4-204ENST00000421462 ZEB2O60315 1214 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms