RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 TMOD4Q9NZQ9 345 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 GJD2Q9UKL4 321 aa13.35□□□□□ -0.27
SSBP3-206ENST00000420121 ADCY3O60266 1144 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
SSBP3-206ENST00000420121 CCL5P13501 91 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 PXYLP1Q8TE99 480 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
SSBP3-206ENST00000420121 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
SSBP3-206ENST00000420121 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 CYP2D7A0A087X1C5 515 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 A0A1W2PRG0 241 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 GJB1P08034 283 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 IRX3P78415 501 aaPredicted RBP13.33□□□□□ -0.28
SSBP3-206ENST00000420121 SEPT2Q15019 361 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 Q3C1V9 767 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 UBE2Q1Q7Z7E8 422 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 DYNLL2Q96FJ2 89 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■□□□ 11.4
SSBP3-206ENST00000420121 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
SSBP3-206ENST00000420121 CNMDO75829 334 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 INHAP05111 366 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 VCAM1P19320 739 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 GJA8P48165 433 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
SSBP3-206ENST00000420121 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 SIAH1Q8IUQ4 282 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-206ENST00000420121 COA7Q96BR5 231 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 SALL3Q9BXA9 1300 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-206ENST00000420121 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L21D6R901 530 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 ERVK-9P63128 1117 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 ERVK-24P63145 666 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 UBXN2AP68543 259 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 KIAA1755Q5JYT7 1200 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 CATSPERGQ6ZRH7 1159 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 OSBP2Q969R2 916 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 FEZ1Q99689 392 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 RNF208Q9H0X6 261 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 PORCNQ9H237 461 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 CABP5Q9NP86 173 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 TAOK2Q9UL54 1235 aa13.31□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 SLC34A2O95436 690 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 AKR1B1P15121 316 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 CDK8P49336 464 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP14P54578 494 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 TRIM32Q13049 653 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 ZSCAN25Q6NSZ9 544 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 LBX2Q6XYB7 198 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 GPRC5AQ8NFJ5 357 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 U2AF1L4Q8WU68 220 aaKnown RBP13.3□□□□□ -0.28
SSBP3-206ENST00000420121 USP6NLQ92738 828 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 STRBPQ96SI9 672 aaKnown RBP13.3□□□□□ -0.28
SSBP3-206ENST00000420121 PAK6Q9NQU5 681 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-206ENST00000420121 BIN2Q9UBW5 565 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-206ENST00000420121 SWAP70Q9UH65 585 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
SSBP3-206ENST00000420121 MYH4Q9Y623 1939 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-206ENST00000420121 GSG1L2A8MUP6 293 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 SGPL1O95470 568 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 TMEM179Q6ZVK1 233 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 GTF3C2Q8WUA4 911 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-206ENST00000420121 TRIB2Q92519 343 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 RPAP3Q9H6T3 665 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-206ENST00000420121 EPB41L4AQ9HCS5 686 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-206ENST00000420121 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
SSBP3-206ENST00000420121 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
SSBP3-206ENST00000420121 MORN1Q5T089 497 aa13.28□□□□□ -0.28
SSBP3-206ENST00000420121 GPR142Q7Z601 462 aa13.28□□□□□ -0.28
SSBP3-206ENST00000420121 NKX2-3Q8TAU0 364 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms