RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ZNF213O14771 459 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 DDIT3P35638 169 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 KCNC4Q03721 635 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 SLC4A8Q2Y0W8 1093 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 NBPF9Q3BBW0 867 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 BLOC1S2Q6QNY1 142 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 DHX32Q7L7V1 743 aaKnown RBP8.1□□□□□ -1.11
CPS1-202ENST00000417946 GPC2Q8N158 579 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 FBXL16Q8N461 479 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 SLC44A5Q8NCS7 719 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 TRPM4Q8TD43 1214 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 DPF2Q92785 391 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 LRRC2Q9BYS8 371 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 MYOZ2Q9NPC6 264 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 PDRG1Q9NUG6 133 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 MCM9Q9NXL9 1143 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 ZNF70Q9UC06 446 aaPredicted RBP8.1□□□□□ -1.11
CPS1-202ENST00000417946 TPCN1Q9ULQ1 816 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 CYP46A1Q9Y6A2 500 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 SCN4AP35499 1836 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 MINDY4BA8MYZ0 360 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 K7ELQ4 463 aaPredicted RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 WNT10BO00744 389 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 SH2B2O14492 632 aaPredicted RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 PRC1O43663 620 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 PRDM1O75626 825 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 PSMA5P28066 241 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 USP5P45974 858 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 HIRAP54198 1017 aaPredicted RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 EIF6P56537 245 aaKnown RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 EVCP57679 992 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 PICALMQ13492 652 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 CUL4AQ13619 759 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 SEC23AQ15436 765 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 CHST3Q7LGC8 479 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 METTL16Q86W50 562 aaKnown RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 NCOA7Q8NI08 942 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 DDRGK1Q96HY6 314 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 TMX3Q96JJ7 454 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 NOL10Q9BSC4 688 aaKnown RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 GPRC5DQ9NZD1 345 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 SEPT9Q9UHD8 586 aaPredicted RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
CPS1-202ENST00000417946 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 SSC5DA1L4H1 1573 aa8.09□□□□□ -1.11
CPS1-202ENST00000417946 PLIN4Q96Q06 1357 aa8.09□□□□□ -1.12
CPS1-202ENST00000417946 ATAD5Q96QE3 1844 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 CLRN2A0PK11 232 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 KDM4AO75164 1064 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 ENTPD3O75355 529 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
CPS1-202ENST00000417946 RASA1P20936 1047 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 SHMT1P34896 483 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 EPS15P42566 896 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 RRP1BQ14684 758 aaKnown RBP8.08□□□□□ -1.12
CPS1-202ENST00000417946 DLGAP5Q15398 846 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 Q6ZUG5 572 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
CPS1-202ENST00000417946 STK11IPQ8N1F8 1099 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 IGDCC4Q8TDY8 1250 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 TEPSINQ96N21 525 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.08□□□□□ -1.12
CPS1-202ENST00000417946 EHD4Q9H223 541 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 ZSWIM5Q9P217 1185 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 CNOT7Q9UIV1 285 aaKnown RBP8.08□□□□□ -1.12
CPS1-202ENST00000417946 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 NID2Q14112 1375 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 OTOFQ9HC10 1997 aa8.08□□□□□ -1.12
CPS1-202ENST00000417946 IGKV6D-41A0A0C4DH26 115 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 POTECB2RU33 542 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 NMT2O60551 498 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 HMGB1P09429 215 aaKnown RBP8.07□□□□□ -1.12
CPS1-202ENST00000417946 PCP11498 1178 aaKnown RBP8.07□□□□□ -1.12
CPS1-202ENST00000417946 MCM5P33992 734 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 NOVP48745 357 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 CDK8P49336 464 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 MMP14P50281 582 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 RBM5P52756 815 aaKnown RBP eCLIP8.07□□□□□ -1.12
CPS1-202ENST00000417946 JAG1P78504 1218 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 TCP10Q12799 353 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 ME3Q16798 604 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 SHROOM1Q2M3G4 852 aaPredicted RBP8.07□□□□□ -1.12
CPS1-202ENST00000417946 KIF4BQ2VIQ3 1234 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 TBC1D10BQ4KMP7 808 aaPredicted RBP8.07□□□□□ -1.12
CPS1-202ENST00000417946 RCSD1Q6JBY9 416 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 MFSD6Q6ZSS7 791 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 HSCBQ8IWL3 235 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 IL27Q8NEV9 243 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 BRF1Q92994 677 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 KRT23Q9C075 422 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 LY9Q9HBG7 655 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
CPS1-202ENST00000417946 SCAF8Q9UPN6 1271 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms