RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 SEPT4O43236 478 aa19.62■□□□□ 0.73
CPNE1-208ENST00000414711 CHD9Q3L8U1 2897 aa19.62■□□□□ 0.73
CPNE1-208ENST00000414711 XIRP2A4UGR9 3374 aa19.61■□□□□ 0.73
CPNE1-208ENST00000414711 PQBP1O60828 265 aaKnown RBP19.61■□□□□ 0.73
CPNE1-208ENST00000414711 PLXNA1Q9UIW2 1896 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 GRXCR1A8MXD5 290 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 JAG1P78504 1218 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 TFF2Q03403 129 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 AAK1Q2M2I8 961 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 FAM47AQ5JRC9 791 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 OLFML2BQ68BL8 750 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.6■□□□□ 0.731e-12■■■■□ 22.3
CPNE1-208ENST00000414711 TMEM39AQ9NV64 488 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 PHF24Q9UPV7 400 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
CPNE1-208ENST00000414711 KCNQ1P51787 676 aa19.59■□□□□ 0.73
CPNE1-208ENST00000414711 MECOMQ03112 1051 aa19.59■□□□□ 0.73
CPNE1-208ENST00000414711 EXOSC9Q06265 439 aaKnown RBP19.59■□□□□ 0.73
CPNE1-208ENST00000414711 RASGRF1Q13972 1273 aa19.59■□□□□ 0.73
CPNE1-208ENST00000414711 SHROOM1Q2M3G4 852 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-208ENST00000414711 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-208ENST00000414711 ATG9AQ7Z3C6 839 aa19.59■□□□□ 0.73
CPNE1-208ENST00000414711 EMILIN3Q9NT22 766 aa19.59■□□□□ 0.73
CPNE1-208ENST00000414711 ZNF236Q9UL36 1845 aa19.59■□□□□ 0.73
CPNE1-208ENST00000414711 PDS5AQ29RF7 1337 aaKnown RBP19.58■□□□□ 0.73
CPNE1-208ENST00000414711 ZBTB22O15209 634 aa19.58■□□□□ 0.72
CPNE1-208ENST00000414711 MAP4K4O95819 1239 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-208ENST00000414711 RFX5P48382 616 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L2Q6R6M4 530 aa19.58■□□□□ 0.72
CPNE1-208ENST00000414711 PI4KBQ9UBF8 816 aa19.58■□□□□ 0.72
CPNE1-208ENST00000414711 GDF11O95390 407 aa19.57■□□□□ 0.72
CPNE1-208ENST00000414711 CCDC102BQ68D86 513 aa19.57■□□□□ 0.72
CPNE1-208ENST00000414711 DPP9Q86TI2 863 aa19.57■□□□□ 0.72
CPNE1-208ENST00000414711 ZNF384Q8TF68 577 aa19.57■□□□□ 0.72
CPNE1-208ENST00000414711 ZBTB21Q9ULJ3 1066 aa19.57■□□□□ 0.72
CPNE1-208ENST00000414711 RAB30Q15771 203 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 RASIP1Q5U651 963 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 CCDC174Q6PII3 467 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 ERICH6Q7L0X2 663 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 MICALL1Q8N3F8 863 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 SLC44A5Q8NCS7 719 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 DNAJC18Q9H819 358 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 GINM1Q9NU53 330 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 BTBD7Q9P203 1132 aa19.56■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L15C9J2P7 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L13C9JLJ4 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L11C9JVI0 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L18D6R9N7 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L22D6RA61 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L17D6RBQ6 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L19D6RCP7 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L20D6RJB6 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 GPR37L1O60883 481 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 ADORA2AP29274 412 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 ADORA1P30542 326 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 USP17L24Q0WX57 530 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 TEX11Q8IYF3 940 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 C12orf42Q96LP6 360 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 SIL1Q9H173 461 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 C11orf16Q9NQ32 467 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 MSRAQ9UJ68 235 aa19.55■□□□□ 0.72
CPNE1-208ENST00000414711 CHD7Q9P2D1 2997 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 A0A1W2PQ45 241 aaPredicted RBP19.54■□□□□ 0.72
CPNE1-208ENST00000414711 A0A1W2PQY0 241 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 FAM86C2PA6NEL3 165 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 FAAP100Q0VG06 881 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 PPIGQ13427 754 aaKnown RBP eCLIP19.54■□□□□ 0.722e-16■□□□□ 11.1
CPNE1-208ENST00000414711 PRAMEF19Q5SWL8 479 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 LBX2Q6XYB7 198 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 FEZ1Q99689 392 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 DHX36Q9H2U1 1008 aaKnown RBP19.54■□□□□ 0.72
CPNE1-208ENST00000414711 XPNPEP3Q9NQH7 507 aa19.54■□□□□ 0.72
CPNE1-208ENST00000414711 CIAO1O76071 339 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 TIMP1P01033 207 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 GSTO1P78417 241 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 ZYXQ15942 572 aaKnown RBP19.53■□□□□ 0.72
CPNE1-208ENST00000414711 TMEM240Q5SV17 173 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 ANKRD33Q7Z3H0 272 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 TRIM34Q9BYJ4 488 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 NKX2-4Q9H2Z4 354 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 REV3LO60673 3130 aa19.53■□□□□ 0.72
CPNE1-208ENST00000414711 DCDC2CA8MYV0 355 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 ERC2O15083 957 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 LDHCP07864 332 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 RARBP10826 455 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 MRE11P49959 708 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 SKIV2LQ15477 1246 aaKnown RBP19.52■□□□□ 0.72
CPNE1-208ENST00000414711 MFSD5Q6N075 450 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 CATSPERGQ6ZRH7 1159 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 C16orf59Q7L2K0 433 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 RNF180Q86T96 592 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 CRACR2BQ8N4Y2 399 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-208ENST00000414711 TOX2Q96NM4 488 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 SLC28A3Q9HAS3 691 aa19.52■□□□□ 0.72
CPNE1-208ENST00000414711 SPDYE16A6NNV3 312 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-208ENST00000414711 PGK1P00558 417 aa19.51■□□□□ 0.71
CPNE1-208ENST00000414711 VCAM1P19320 739 aa19.51■□□□□ 0.71
CPNE1-208ENST00000414711 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
CPNE1-208ENST00000414711 FBXO3Q9UK99 471 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms