RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 RAET1EQ8TD07 263 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 CCDC17Q96LX7 622 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 STAP2Q9UGK3 403 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 PDE1AP54750 535 aa18.81■□□□□ 0.6
MCF2L-211ENST00000413354 C16orf86Q6ZW13 317 aa18.81■□□□□ 0.6
MCF2L-211ENST00000413354 SLC44A5Q8NCS7 719 aa18.81■□□□□ 0.6
MCF2L-211ENST00000413354 DYNLL2Q96FJ2 89 aa18.81■□□□□ 0.6
MCF2L-211ENST00000413354 ZNF333Q96JL9 665 aa18.81■□□□□ 0.6
MCF2L-211ENST00000413354 EMILIN3Q9NT22 766 aa18.81■□□□□ 0.6
MCF2L-211ENST00000413354 TNPO2O14787 897 aaKnown RBP18.8■□□□□ 0.6
MCF2L-211ENST00000413354 GUCY1A2P33402 732 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 CDK8P49336 464 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 EVX2Q03828 476 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 SEPT2Q15019 361 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 SBK1Q52WX2 424 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 CTR9Q6PD62 1173 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 COA7Q96BR5 231 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 EVI5LQ96CN4 794 aa18.8■□□□□ 0.6
MCF2L-211ENST00000413354 GSG1L2A8MUP6 293 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 M0R2C6 588 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 HERVK_113P62684 666 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 ZYXQ15942 572 aaKnown RBP18.79■□□□□ 0.6
MCF2L-211ENST00000413354 TMEM106CQ9BVX2 250 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 NACAP1Q9BZK3 213 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 SH2D4AQ9H788 454 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 ARHGEF10LQ9HCE6 1279 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 ROBO3Q96MS0 1386 aa18.79■□□□□ 0.6
MCF2L-211ENST00000413354 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L15C9J2P7 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L13C9JLJ4 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L11C9JVI0 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L18D6R9N7 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L22D6RA61 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L17D6RBQ6 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L19D6RCP7 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L20D6RJB6 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 TDO2P48775 406 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 PRKCZQ05513 592 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L24Q0WX57 530 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 ZMYM1Q5SVZ6 1142 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 TICAM2Q86XR7 235 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 ACER1Q8TDN7 264 aa18.78■□□□□ 0.6
MCF2L-211ENST00000413354 GREB1LQ9C091 1923 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-211ENST00000413354 PDE4DIPQ5VU43 2346 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 APPP05067 770 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 AKR1B1P15121 316 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 VCAM1P19320 739 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 GRK4P32298 578 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 ICA1Q05084 483 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 SLAIN1Q8ND83 568 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.6
MCF2L-211ENST00000413354 ZNF287Q9HBT7 754 aa18.77■□□□□ 0.6
MCF2L-211ENST00000413354 PATL2C9JE40 543 aaKnown RBP18.76■□□□□ 0.59
MCF2L-211ENST00000413354 NUCB1Q02818 461 aa18.76■□□□□ 0.59
MCF2L-211ENST00000413354 IRF5Q13568 498 aa18.76■□□□□ 0.59
MCF2L-211ENST00000413354 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
MCF2L-211ENST00000413354 CHD1LQ86WJ1 897 aa18.76■□□□□ 0.59
MCF2L-211ENST00000413354 GPRC5AQ8NFJ5 357 aa18.76■□□□□ 0.59
MCF2L-211ENST00000413354 SH3TC2Q8TF17 1288 aa18.76■□□□□ 0.59
MCF2L-211ENST00000413354 EPB41L4AQ9HCS5 686 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-211ENST00000413354 MINDY4BA8MYZ0 360 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 IGHDP01880 384 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 FLT3LGP49771 235 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 UBXN2AP68543 259 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 CATSPERGQ6ZRH7 1159 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 LPAR1Q92633 364 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 NAPBQ9H115 298 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
MCF2L-211ENST00000413354 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 ERVK-24P63145 666 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 CCAR1Q8IX12 1150 aaKnown RBP18.74■□□□□ 0.59
MCF2L-211ENST00000413354 IFNL3Q8IZI9 196 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 PXYLP1Q8TE99 480 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
MCF2L-211ENST00000413354 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-211ENST00000413354 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 BIN2Q9UBW5 565 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-211ENST00000413354 GABRQQ9UN88 632 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
MCF2L-211ENST00000413354 PARP14Q460N5 1801 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 A0A1W2PRG0 241 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 POTEFA5A3E0 1075 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 SMIM22K7EJ46 135 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
MCF2L-211ENST00000413354 MAPK4P31152 587 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 CCNA1P78396 465 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 LBX2Q6XYB7 198 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 PAGR1Q9BTK6 254 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 HELLSQ9NRZ9 838 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 TMX2Q9Y320 296 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 CENPFP49454 3210 aa18.73■□□□□ 0.59
MCF2L-211ENST00000413354 PLXNB2O15031 1838 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 A0A0G2JMZ2 1700 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 ADCY3O60266 1144 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
MCF2L-211ENST00000413354 TANGO6Q9C0B7 1094 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms