RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CDC6Q99741 560 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 ZBED2Q9BTP6 218 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 C1QTNF2Q9BXJ5 285 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 ANLNQ9NQW6 1124 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 TRMT13Q9NUP7 481 aaKnown RBP6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 ABCF2Q9UG63 623 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 SYNPO2Q9UMS6 1093 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 GIT1Q9Y2X7 761 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 SH3BP1Q9Y3L3 701 aa6.97□□□□□ -1.29
CBX1P3-201ENST00000413296 UPK3BL1B0FP48 263 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 UPK3BL2E5RIL1 263 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 HMMRO75330 724 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 MAP3K6O95382 1288 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 OAS2P29728 719 aaKnown RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 ADD2P35612 726 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 ALDH5A1P51649 535 aaPredicted RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 NEK4P51957 841 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 CLCQ05315 142 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 LAMC2Q13753 1193 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 KIF22Q14807 665 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 ATP13A4Q4VNC1 1196 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 GJC2Q5T442 439 aaPredicted RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 CYB5RLQ6IPT4 315 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 PTCRAQ6ISU1 281 aaPredicted RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 BNC2Q6ZN30 1099 aaPredicted RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 LMNTD2Q8IXW0 634 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 CPA6Q8N4T0 437 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 NKAIN3Q8N8D7 197 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 NELL1Q92832 810 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 ZNF496Q96IT1 587 aaPredicted RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 LRGUKQ96M69 825 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 CENPOQ9BU64 300 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 NAA15Q9BXJ9 866 aaKnown RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 AP1M1Q9BXS5 423 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 PHACTR1Q9C0D0 580 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 EPN3Q9H201 632 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 ODF2LQ9ULJ1 636 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 TTLL3Q9Y4R7 772 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 ITIH6Q6UXX5 1313 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
CBX1P3-201ENST00000413296 EREGO14944 169 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 TLR5O60602 858 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 TMCC2O75069 709 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 GNRH1P01148 92 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 MYBL2P10244 700 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 HSD3B1P14060 373 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 ZKSCAN1P17029 563 aaPredicted RBP6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 POU3F2P20265 443 aaPredicted RBP6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 APBA1Q02410 837 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 PRKG2Q13237 762 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 GRB10Q13322 594 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 INTS6LQ5JSJ4 861 aaKnown RBP6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 FAM209AQ5JX71 171 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 HEATR6Q6AI08 1181 aaKnown RBP6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 FAM180BQ6P0A1 224 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 TTC6Q86TZ1 520 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 CCDC84Q86UT8 332 aaPredicted RBP6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 SNX32Q86XE0 403 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 NBPF15Q8N660 670 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 GATAD2BQ8WXI9 593 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 BAP1Q92560 729 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 CCDC47Q96A33 483 aaKnown RBP6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 KIFC2Q96AC6 838 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 GCC1Q96CN9 775 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 AIFM3Q96NN9 605 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 NELL2Q99435 816 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 SLC13A1Q9BZW2 595 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 CEP44Q9C0F1 390 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 IFT22Q9H7X7 185 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 ELP3Q9H9T3 547 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 SMC4Q9NTJ3 1288 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 METRNQ9UJH8 293 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 FBXO10Q9UK96 956 aa6.95□□□□□ -1.3
CBX1P3-201ENST00000413296 SUSD5O60279 629 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 VAMP4O75379 141 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 MBD4O95243 580 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 ASGR2P07307 311 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 PYGMP11217 842 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 RECQLP46063 649 aaPredicted RBP6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 NCAPHQ15003 741 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 SEPT7Q16181 437 aaKnown RBP6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 TUBB8Q3ZCM7 444 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 TMEM240Q5SV17 173 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 INTS11Q5TA45 600 aaKnown RBP6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 DUSP27Q5VZP5 1158 aa6.94□□□□□ -1.3
CBX1P3-201ENST00000413296 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms