RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 BMP2KLQ5H9B9 411 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 PRRT2Q7Z6L0 340 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-202ENST00000412686 ZNF280CQ8ND82 737 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.2□□□□□ -0.94
CPSF4-202ENST00000412686 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 SWAP70Q9UH65 585 aa9.2□□□□□ -0.94
CPSF4-202ENST00000412686 ZSWIM8A7E2V4 1837 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 CXCL11O14625 94 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 SGSM2O43147 1006 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 CTCFP49711 727 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-202ENST00000412686 PTH1RQ03431 593 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 CRHR2Q13324 411 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 ALX1Q15699 326 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 FAM47AQ5JRC9 791 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 TREML2Q5T2D2 321 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 TICAM2Q86XR7 235 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 TBC1D10CQ8IV04 446 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 WDR18Q9BV38 432 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 CABP5Q9NP86 173 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 CASP8AP2Q9UKL3 1982 aa9.19□□□□□ -0.94
CPSF4-202ENST00000412686 PDHXO00330 501 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 ECM2O94769 699 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-202ENST00000412686 CYP2C8P10632 490 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 BACE1P56817 501 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 INHBEP58166 350 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 TAF1CQ15572 869 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-202ENST00000412686 KIAA1755Q5JYT7 1200 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 TMEM179Q6ZVK1 233 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 SIAH1Q8IUQ4 282 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 RAD50Q92878 1312 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 FEZ1Q99689 392 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 MKNK2Q9HBH9 465 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 EMILIN3Q9NT22 766 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
CPSF4-202ENST00000412686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
CPSF4-202ENST00000412686 ZMYM6O95789 1325 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 NEDD4P46934 1319 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 CA12O43570 354 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 PEX10O60683 326 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 EEF2P13639 858 aaKnown RBP9.17□□□□□ -0.94
CPSF4-202ENST00000412686 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
CPSF4-202ENST00000412686 CAP1Q01518 475 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 ATP2B2Q01814 1243 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 ICA1Q05084 483 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 RRP12Q5JTH9 1297 aaKnown RBP9.17□□□□□ -0.94
CPSF4-202ENST00000412686 ANKRD23Q86SG2 305 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 RUFY2Q8WXA3 655 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 CCDC17Q96LX7 622 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 ESYT1Q9BSJ8 1104 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 DSCC1Q9BVC3 393 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 GINM1Q9NU53 330 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 ANAPC4Q9UJX5 808 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 TAF6LQ9Y6J9 622 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 MYH4Q9Y623 1939 aa9.17□□□□□ -0.94
CPSF4-202ENST00000412686 ADGRA2Q96PE1 1338 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 IGKV6D-41A0A0C4DH26 115 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 GPR25O00155 361 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 NMT2O60551 498 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 CDC45O75419 566 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 SLC3A2P08195 630 aaKnown RBP9.16□□□□□ -0.94
CPSF4-202ENST00000412686 TFAP4Q01664 338 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 PDE4BQ07343 736 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 COL13A1Q5TAT6 717 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-202ENST00000412686 OTUD7BQ6GQQ9 843 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 FASTKD5Q7L8L6 764 aaKnown RBP9.16□□□□□ -0.94
CPSF4-202ENST00000412686 ZNF444Q8N0Y2 327 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-202ENST00000412686 ZNF296Q8WUU4 475 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-202ENST00000412686 CEP95Q96GE4 821 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 TOMM22Q9NS69 142 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 CPA4Q9UI42 421 aa9.16□□□□□ -0.94
CPSF4-202ENST00000412686 PLIN4Q96Q06 1357 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 TSPY2A6NKD2 308 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 C19orf81C9J6K1 198 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 ZNF213O14771 459 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 RANBP6O60518 1105 aaKnown RBP9.15□□□□□ -0.94
CPSF4-202ENST00000412686 FGRP09769 529 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 TSPY3P0CV98 308 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 TSPY8P0CW00 308 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 VCAM1P19320 739 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 AKNAD1Q5T1N1 836 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 USP17L2Q6R6M4 530 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 RASGRP2Q7LDG7 609 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 SPICE1Q8N0Z3 855 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 LRRC47Q8N1G4 583 aaKnown RBP9.15□□□□□ -0.94
CPSF4-202ENST00000412686 PROCA1Q8NCQ7 364 aaPredicted RBP9.15□□□□□ -0.94
CPSF4-202ENST00000412686 NEDD1Q8NHV4 660 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 STAG1Q8WVM7 1258 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 CHMP4CQ96CF2 233 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 C12orf42Q96LP6 360 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
CPSF4-202ENST00000412686 LSG1Q9H089 658 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms