RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 POLR2BP30876 1174 aaKnown RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 PMS1P54277 932 aaKnown RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 SSRP1Q08945 709 aaKnown RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 NKG7Q16617 165 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 LONRF2Q1L5Z9 754 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 KIAA1211LQ6NV74 962 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 SPATC1Q76KD6 591 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 KIAA0907Q7Z7F0 614 aaPredicted RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 SYNPOQ8N3V7 929 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 C2CD4AQ8NCU7 369 aaPredicted RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 SMARCC1Q92922 1105 aaPredicted RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 ISL2Q96A47 359 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 SUCOQ9UBS9 1254 aaKnown RBP5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 ACTL7BQ9Y614 415 aa5.9□□□□□ -1.46
RNU2-28P-201ENST00000410457 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 F8W735 103 aaPredicted RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 PPM1GO15355 546 aaPredicted RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 DIAPH1O60610 1272 aaKnown RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 UBOX5O94941 541 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 NAT2P11245 290 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 DRD2P14416 443 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 ASPAP45381 313 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 SQSTM1Q13501 440 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 SLC10A6Q3KNW5 377 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 GNPTABQ3T906 1256 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 ZC3H12BQ5HYM0 836 aaKnown RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 RNF187Q5TA31 235 aaPredicted RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 PRAMEF13Q5VWM6 474 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 Q6ZS46 218 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 C16orf86Q6ZW13 317 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 DYMQ7RTS9 669 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 SMYD4Q8IYR2 804 aaPredicted RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 C12orf50Q8NA57 414 aaPredicted RBP5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 SGSM3Q96HU1 749 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 SLC6A18Q96N87 628 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 KIF2CQ99661 725 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 FOXQ1Q9C009 403 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 FAM105AQ9NUU6 356 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 PCDHB10Q9UN67 800 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 PRKAB1Q9Y478 270 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 KDM2BQ8NHM5 1336 aa5.89□□□□□ -1.47
RNU2-28P-201ENST00000410457 BTBD11A6QL63 1104 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 CLEC3AO75596 197 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 LRIG2O94898 1065 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 GBP1P32455 592 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 TMEM192Q8IY95 271 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 MFSD2AQ8NA29 543 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 ZSWIM2Q8NEG5 633 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 FEZ1Q99689 392 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 DPH2Q9BQC3 489 aaPredicted RBP5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 CEP41Q9BYV8 373 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 BRINP2Q9C0B6 783 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 SLKQ9H2G2 1235 aaPredicted RBP5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 PFDN2Q9UHV9 154 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 PCOLCE2Q9UKZ9 415 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 LEMD3Q9Y2U8 911 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 PTCH2Q9Y6C5 1203 aa5.88□□□□□ -1.47
RNU2-28P-201ENST00000410457 ANKRD34BA5PLL1 514 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 FAM86C2PA6NEL3 165 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 FAM229AH3BQW9 127 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 RNGTTO60942 597 aaKnown RBP5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 SPATA31C1P0DKV0 1188 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 TMEM67Q5HYA8 995 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 ARMCX6Q7L4S7 300 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 PODNQ7Z5L7 613 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 UBE3DQ7Z6J8 389 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 LENG1Q96BZ8 264 aaPredicted RBP5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 SLC26A8Q96RN1 970 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 SPATA9Q9BWV2 254 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 ACSS3Q9H6R3 686 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 AKTIPQ9H8T0 292 aa5.87□□□□□ -1.47
RNU2-28P-201ENST00000410457 AGRPO00253 132 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 ADCY3O60266 1144 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 PREPP48147 710 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 NRG1Q02297 640 aaPredicted RBP5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 TCEA2Q15560 299 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 UVSSAQ2YD98 709 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 AGGF1Q8N302 714 aaeCLIP5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 ZBTB38Q8NAP3 1195 aaPredicted RBP5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 BAHD1Q8TBE0 780 aaPredicted RBP5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 ZCRB1Q8TBF4 217 aaKnown RBP5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 PPP1R13LQ8WUF5 828 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 HAUS7Q99871 368 aa5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 SSU72Q9NP77 194 aaKnown RBP5.86□□□□□ -1.47
RNU2-28P-201ENST00000410457 CCDC163A0A0D9SF12 145 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 C9IYK1 514 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 RNF4P78317 190 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 PTPROQ16827 1216 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 SHISA2Q6UWI4 295 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 BEND7Q8N7W2 519 aaPredicted RBP5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 NACC1Q96RE7 527 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 YIPF2Q9BWQ6 316 aa5.85□□□□□ -1.47
RNU2-28P-201ENST00000410457 SUSD2Q9UGT4 822 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms