RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 SMARCC1Q92922 1105 aaPredicted RBP18.16■□□□□ 0.5
HOXD3-202ENST00000410016 TNFRSF25Q93038 417 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
HOXD3-202ENST00000410016 EPSTI1Q96J88 318 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 DUOX1Q9NRD9 1551 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 USP17L12C9JPN9 530 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 USP17L21D6R901 530 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 IQCA1Q86XH1 822 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 LINC00116Q8NCU8 138 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
HOXD3-202ENST00000410016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
HOXD3-202ENST00000410016 KLRK1P26718 216 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 KMT5BQ4FZB7 885 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 SH3RF1Q7Z6J0 888 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 TRMT44Q8IYL2 757 aaKnown RBP18.15■□□□□ 0.5
HOXD3-202ENST00000410016 DACH1Q9UI36 760 aa18.15■□□□□ 0.5
HOXD3-202ENST00000410016 DDX41Q9UJV9 622 aaKnown RBP18.15■□□□□ 0.5
HOXD3-202ENST00000410016 FANCGO15287 622 aa18.14■□□□□ 0.49
HOXD3-202ENST00000410016 CCP110O43303 1012 aa18.14■□□□□ 0.49
HOXD3-202ENST00000410016 OGFRQ9NZT2 677 aa18.14■□□□□ 0.49
HOXD3-202ENST00000410016 MYH2Q9UKX2 1941 aa18.14■□□□□ 0.49
HOXD3-202ENST00000410016 TAF1P21675 1872 aa18.14■□□□□ 0.49
HOXD3-202ENST00000410016 SLFN14P0C7P3 912 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 CALM1P0DP23 149 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 CALM2P0DP24 149 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 CALM3P0DP25 149 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 ERCC5P28715 1186 aaPredicted RBP18.13■□□□□ 0.49
HOXD3-202ENST00000410016 ELF2Q15723 593 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 NOM1Q5C9Z4 860 aaKnown RBP18.13■□□□□ 0.49
HOXD3-202ENST00000410016 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
HOXD3-202ENST00000410016 SAMSN1Q9NSI8 373 aaKnown RBP18.13■□□□□ 0.49
HOXD3-202ENST00000410016 SEMA3EO15041 775 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 DDAH1O94760 285 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 PLCD1P51178 756 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 MECOMQ03112 1051 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 TC2NQ8N9U0 490 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 DHX58Q96C10 678 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 NRAPQ86VF7 1730 aa18.13■□□□□ 0.49
HOXD3-202ENST00000410016 ARHGAP6O43182 974 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 ORC4O43929 436 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 NR1I3Q14994 352 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 SPECC1LQ69YQ0 1117 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 SRBD1Q8N5C6 995 aaKnown RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 LRRN4CLQ8ND94 238 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 ZNF397Q8NF99 534 aaPredicted RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 SYMPKQ92797 1274 aaKnown RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 FERMT2Q96AC1 680 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 PAGE5Q96GU1 130 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 PHLPP2Q6ZVD8 1323 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 BAZ2AQ9UIF9 1905 aaKnown RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 NMT2O60551 498 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 CDK11BP21127 795 aaKnown RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 TBC1D9BQ66K14 1250 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 APTXQ7Z2E3 356 aaKnown RBP18.12■□□□□ 0.49
HOXD3-202ENST00000410016 PRDM4Q9UKN5 801 aa18.12■□□□□ 0.49
HOXD3-202ENST00000410016 KCNQ4P56696 695 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 CT47A1Q5JQC4 288 aaPredicted RBP18.11■□□□□ 0.49
HOXD3-202ENST00000410016 FBXO38Q6PIJ6 1188 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 DNAI1Q9UI46 699 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 CNTNAP5Q8WYK1 1306 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 BMP15O95972 392 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
HOXD3-202ENST00000410016 RPS8P62241 208 aaKnown RBP18.11■□□□□ 0.49
HOXD3-202ENST00000410016 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
HOXD3-202ENST00000410016 BAG1Q99933 345 aaPredicted RBP18.11■□□□□ 0.49
HOXD3-202ENST00000410016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.11■□□□□ 0.49
HOXD3-202ENST00000410016 PDS5AQ29RF7 1337 aaKnown RBP18.11■□□□□ 0.49
HOXD3-202ENST00000410016 A0A1B0GTH6 734 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 VWA3AA6NCI4 1184 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 STX10O60499 249 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 CUL4BQ13620 913 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 ZNF174Q15697 407 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 PPP2R2CQ9Y2T4 447 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 MYH6P13533 1939 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
HOXD3-202ENST00000410016 SCN7AQ01118 1682 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 RGL2O15211 777 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 VEGFAP15692 232 aaPredicted RBP18.1■□□□□ 0.49
HOXD3-202ENST00000410016 CASP1P29466 404 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 AFMP43652 599 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 ADKP55263 362 aaKnown RBP18.1■□□□□ 0.49
HOXD3-202ENST00000410016 ATP2C1P98194 919 aaPredicted RBP18.1■□□□□ 0.49
HOXD3-202ENST00000410016 DPYDQ12882 1025 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 ERCC6LQ2NKX8 1250 aa18.1■□□□□ 0.49
HOXD3-202ENST00000410016 PRDX5P30044 214 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 DMTNQ08495 405 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 PTGDRQ13258 359 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 TTC38Q5R3I4 469 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 ATP8A2Q9NTI2 1148 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 ZSCAN12O43309 604 aa18.09■□□□□ 0.49
HOXD3-202ENST00000410016 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms