RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 RAG1P15918 1043 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 RAB33AQ14088 237 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 DOC2BQ14184 412 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 RSPO4Q2I0M5 234 aaPredicted RBP9.79□□□□□ -0.84
PTPN12-202ENST00000407343 TNNI3KQ59H18 835 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 TMEM192Q8IY95 271 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 CELF2-AS1Q8N7Q2 184 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
PTPN12-202ENST00000407343 CCNFP41002 786 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 NBPF6Q5VWK0 638 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 LETMD1Q6P1Q0 360 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 ZAR1Q86SH2 424 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 TOP6BLQ8N6T0 577 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 CCDC74BQ96LY2 380 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 NBPF4Q96M43 638 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 MIPEPQ99797 713 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 LNPKQ9C0E8 428 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 ACTR10Q9NZ32 417 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 STOML1Q9UBI4 398 aa9.78□□□□□ -0.84
PTPN12-202ENST00000407343 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
PTPN12-202ENST00000407343 H2AFB2P0C5Z0 115 aa9.77□□□□□ -0.85
PTPN12-202ENST00000407343 CKAP2LQ8IYA6 745 aa9.77□□□□□ -0.85
PTPN12-202ENST00000407343 PHACTR4Q8IZ21 702 aa9.77□□□□□ -0.85
PTPN12-202ENST00000407343 PPFIBP1Q86W92 1011 aa9.76□□□□□ -0.85
PTPN12-202ENST00000407343 CEP131Q9UPN4 1083 aa9.76□□□□□ -0.85
PTPN12-202ENST00000407343 FAM86C2PA6NEL3 165 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 F13BP05160 661 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 FAM87AP0C7U9 286 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 RNF43Q68DV7 783 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 DPH6Q7L8W6 267 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 KLHL6Q8WZ60 621 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 ZNF214Q9UL59 606 aaPredicted RBP9.75□□□□□ -0.85
PTPN12-202ENST00000407343 MSRB2Q9Y3D2 182 aa9.75□□□□□ -0.85
PTPN12-202ENST00000407343 PPP2R5EQ16537 467 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 OGFOD3Q6PK18 319 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 CDH24Q86UP0 819 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 PMFBP1Q8TBY8 1022 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 MFSD14AQ96MC6 490 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 HEXIM2Q96MH2 286 aaKnown RBP9.74□□□□□ -0.85
PTPN12-202ENST00000407343 SLC6A18Q96N87 628 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 U3KQE9 123 aa9.74□□□□□ -0.85
PTPN12-202ENST00000407343 FAM170BA6NMN3 283 aa9.73□□□□□ -0.85
PTPN12-202ENST00000407343 B2RBV5 119 aa9.73□□□□□ -0.85
PTPN12-202ENST00000407343 NFIAQ12857 509 aa9.73□□□□□ -0.85
PTPN12-202ENST00000407343 DDR2Q16832 855 aa9.73□□□□□ -0.85
PTPN12-202ENST00000407343 PCDHB10Q9UN67 800 aa9.73□□□□□ -0.85
PTPN12-202ENST00000407343 C9IYK1 514 aa9.72□□□□□ -0.85
PTPN12-202ENST00000407343 MSTNO14793 375 aa9.72□□□□□ -0.85
PTPN12-202ENST00000407343 DYRK3O43781 588 aa9.72□□□□□ -0.85
PTPN12-202ENST00000407343 PMS1P54277 932 aaKnown RBP9.72□□□□□ -0.85
PTPN12-202ENST00000407343 SOGA3Q5TF21 947 aa9.72□□□□□ -0.85
PTPN12-202ENST00000407343 MRM1Q6IN84 353 aaKnown RBP9.72□□□□□ -0.85
PTPN12-202ENST00000407343 ZNF765Q7L2R6 523 aa9.72□□□□□ -0.85
PTPN12-202ENST00000407343 SUCOQ9UBS9 1254 aaKnown RBP9.72□□□□□ -0.85
PTPN12-202ENST00000407343 SLC12A7Q9Y666 1083 aa9.72□□□□□ -0.85
PTPN12-202ENST00000407343 GBP1P32455 592 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 CCDC144BQ3MJ40 725 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 KREMEN1Q96MU8 473 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 DBNDD2Q9BQY9 259 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPN12-202ENST00000407343 OSBPL2Q9H1P3 480 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 PIF1Q9H611 641 aa9.71□□□□□ -0.86
PTPN12-202ENST00000407343 PHAXQ9H814 394 aaKnown RBP9.71□□□□□ -0.86
PTPN12-202ENST00000407343 GJB6O95452 261 aa9.7□□□□□ -0.86
PTPN12-202ENST00000407343 FSTP19883 344 aa9.7□□□□□ -0.86
PTPN12-202ENST00000407343 RASA3Q14644 834 aa9.7□□□□□ -0.86
PTPN12-202ENST00000407343 NBPF12Q5TAG4 269 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-202ENST00000407343 LARP1BQ659C4 914 aaKnown RBP9.7□□□□□ -0.86
PTPN12-202ENST00000407343 C6orf15Q6UXA7 325 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-202ENST00000407343 RNF141Q8WVD5 230 aa9.7□□□□□ -0.86
PTPN12-202ENST00000407343 ZNF512BQ96KM6 892 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-202ENST00000407343 SIRPGQ9P1W8 387 aa9.7□□□□□ -0.86
PTPN12-202ENST00000407343 SHOXO15266 292 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 IGLV1-40P01703 118 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 FBXL6Q8N531 539 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 SHKBP1Q8TBC3 707 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 Q96M66 194 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 FBXL18Q96ME1 805 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 SUSD2Q9UGT4 822 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 MAPK8IP1Q9UQF2 711 aa9.69□□□□□ -0.86
PTPN12-202ENST00000407343 PRR33A8MZF0 331 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 CLEC3AO75596 197 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 FXNQ16595 210 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 TDRD10Q5VZ19 366 aaKnown RBP9.68□□□□□ -0.86
PTPN12-202ENST00000407343 C22orf34Q6ZV56 151 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 FAM178BQ8IXR5 827 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 MKL1Q969V6 931 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 TRIM55Q9BYV6 548 aa9.68□□□□□ -0.86
PTPN12-202ENST00000407343 IGF2BP3O00425 579 aaKnown RBP eCLIP9.67□□□□□ -0.869e-6■■■□□ 17.5
PTPN12-202ENST00000407343 ETV3P41162 512 aa9.67□□□□□ -0.86
PTPN12-202ENST00000407343 AXDND1Q5T1B0 1012 aaPredicted RBP9.67□□□□□ -0.86
PTPN12-202ENST00000407343 VHLLQ6RSH7 139 aa9.67□□□□□ -0.86
PTPN12-202ENST00000407343 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
PTPN12-202ENST00000407343 GIMAP7Q8NHV1 300 aa9.67□□□□□ -0.86
PTPN12-202ENST00000407343 DHRS1Q96LJ7 313 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms