RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 DACH1Q9UI36 760 aa19.28■□□□□ 0.68
NUP50-203ENST00000407019 RTCBQ9Y3I0 505 aaKnown RBP19.28■□□□□ 0.68
NUP50-203ENST00000407019 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.68
NUP50-203ENST00000407019 FAM205CA6NFA0 338 aa19.27■□□□□ 0.68
NUP50-203ENST00000407019 ACTN4O43707 911 aaKnown RBP19.27■□□□□ 0.68
NUP50-203ENST00000407019 PRR29P0C7W0 189 aa19.27■□□□□ 0.68
NUP50-203ENST00000407019 PDE4BQ07343 736 aa19.27■□□□□ 0.68
NUP50-203ENST00000407019 SBK1Q52WX2 424 aa19.27■□□□□ 0.68
NUP50-203ENST00000407019 CTCFLQ8NI51 663 aaPredicted RBP19.27■□□□□ 0.68
NUP50-203ENST00000407019 ZNF592Q92610 1267 aa19.27■□□□□ 0.68
NUP50-203ENST00000407019 CCNL1Q9UK58 526 aaPredicted RBP19.27■□□□□ 0.68
NUP50-203ENST00000407019 BTAF1O14981 1849 aa19.27■□□□□ 0.67
NUP50-203ENST00000407019 ZBTB22O15209 634 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 BMP15O95972 392 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 KCNJ6P48051 423 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 SARSP49591 514 aaKnown RBP19.26■□□□□ 0.67
NUP50-203ENST00000407019 EVX2Q03828 476 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 CFAP100Q494V2 611 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 TRIML1Q8N9V2 468 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 MLKLQ8NB16 471 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 DPF2Q92785 391 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 FANCLQ9NW38 375 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 TM4SF1P30408 202 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 EARS2Q5JPH6 523 aaKnown RBP19.26■□□□□ 0.67
NUP50-203ENST00000407019 SPTY2D1Q68D10 685 aaPredicted RBP19.26■□□□□ 0.67
NUP50-203ENST00000407019 DZIP1Q86YF9 867 aaKnown RBP19.26■□□□□ 0.67
NUP50-203ENST00000407019 PDILTQ8N807 584 aa19.26■□□□□ 0.67
NUP50-203ENST00000407019 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 KIF2AO00139 706 aaPredicted RBP19.25■□□□□ 0.67
NUP50-203ENST00000407019 NMT2O60551 498 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 CYP2D6P10635 497 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 MORC3Q14149 939 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 FAM47AQ5JRC9 791 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 ANKRD7Q92527 254 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
NUP50-203ENST00000407019 NPHP1O15259 732 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 SYCP1Q15431 976 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 E4F1Q66K89 784 aaPredicted RBP19.24■□□□□ 0.67
NUP50-203ENST00000407019 USP49Q70CQ1 688 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 TXNRD3Q86VQ6 643 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 GRAMD1CQ8IYS0 662 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 UBE2Q2Q8WVN8 375 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
NUP50-203ENST00000407019 TNFRSF25Q93038 417 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 CCDC34Q96HJ3 373 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 PSDA5PKW4 1024 aaPredicted RBP19.24■□□□□ 0.67
NUP50-203ENST00000407019 VSTM4Q8IW00 320 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 SRBD1Q8N5C6 995 aaKnown RBP19.24■□□□□ 0.67
NUP50-203ENST00000407019 FERMT2Q96AC1 680 aa19.24■□□□□ 0.67
NUP50-203ENST00000407019 TSPY2A6NKD2 308 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 NPY5RQ15761 445 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 JAG2Q9Y219 1238 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 CCDC88AQ3V6T2 1871 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 TNRC6CQ9HCJ0 1690 aaKnown RBP19.23■□□□□ 0.67
NUP50-203ENST00000407019 TTC38Q5R3I4 469 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 AMIGO3Q86WK7 504 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 ENOX1Q8TC92 643 aaKnown RBP19.23■□□□□ 0.67
NUP50-203ENST00000407019 DHX58Q96C10 678 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
NUP50-203ENST00000407019 IGSF3O75054 1194 aa19.22■□□□□ 0.67
NUP50-203ENST00000407019 TOP1P11387 765 aaKnown RBP19.22■□□□□ 0.67
NUP50-203ENST00000407019 SCG2P13521 617 aa19.22■□□□□ 0.67
NUP50-203ENST00000407019 ZNF827Q17R98 1081 aa19.22■□□□□ 0.67
NUP50-203ENST00000407019 SPATA20Q8TB22 786 aa19.22■□□□□ 0.67
NUP50-203ENST00000407019 PPP1R13BQ96KQ4 1090 aa19.22■□□□□ 0.67
NUP50-203ENST00000407019 FMR1Q06787 632 aaKnown RBP eCLIP19.21■□□□□ 0.67
NUP50-203ENST00000407019 KIF18AQ8NI77 898 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 EPSTI1Q96J88 318 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 CCDC94Q9BW85 323 aaPredicted RBP19.21■□□□□ 0.67
NUP50-203ENST00000407019 NFE2L3Q9Y4A8 694 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 A0A087X0B3 334 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 TMEM232C9JQI7 657 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 WNT7AO00755 349 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 SLFN14P0C7P3 912 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 KIF5BP33176 963 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 NT5C2P49902 561 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 NCBP1Q09161 790 aaKnown RBP19.21■□□□□ 0.67
NUP50-203ENST00000407019 GRAPQ13588 217 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 ZNF174Q15697 407 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 WDR66Q8TBY9 1149 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 GRAPLQ8TC17 118 aaPredicted RBP19.21■□□□□ 0.67
NUP50-203ENST00000407019 SYMPKQ92797 1274 aaKnown RBP19.21■□□□□ 0.67
NUP50-203ENST00000407019 ANKIB1Q9P2G1 1089 aa19.21■□□□□ 0.67
NUP50-203ENST00000407019 LDHBP07195 334 aaKnown RBP19.2■□□□□ 0.66
NUP50-203ENST00000407019 USP17L8P0C7I0 530 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 USP5P45974 858 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 PLCD1P51178 756 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 NLRP5P59047 1200 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 PFKFB3Q16875 520 aaPredicted RBP19.2■□□□□ 0.66
NUP50-203ENST00000407019 NOM1Q5C9Z4 860 aaKnown RBP19.2■□□□□ 0.66
NUP50-203ENST00000407019 FNBP4Q8N3X1 1017 aaPredicted RBP19.2■□□□□ 0.66
NUP50-203ENST00000407019 ARID3AQ99856 593 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 INTS13Q9NVM9 706 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 LEMD3Q9Y2U8 911 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 THSD7AQ9UPZ6 1657 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 CCP110O43303 1012 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 ZNF18P17022 549 aa19.2■□□□□ 0.66
NUP50-203ENST00000407019 RFC4P35249 363 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms