RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 PNOCQ13519 176 aa20.53■□□□□ 0.88
CHTOP-205ENST00000403433 SLC4A8Q2Y0W8 1093 aa20.53■□□□□ 0.88
CHTOP-205ENST00000403433 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
CHTOP-205ENST00000403433 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
CHTOP-205ENST00000403433 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
CHTOP-205ENST00000403433 ROBO3Q96MS0 1386 aa20.53■□□□□ 0.88
CHTOP-205ENST00000403433 TRIM75PA6NK02 468 aa20.52■□□□□ 0.88
CHTOP-205ENST00000403433 KIF5BP33176 963 aa20.52■□□□□ 0.88
CHTOP-205ENST00000403433 LRMPQ12912 555 aa20.52■□□□□ 0.88
CHTOP-205ENST00000403433 DIXDC1Q155Q3 683 aa20.52■□□□□ 0.88
CHTOP-205ENST00000403433 CCDC144BQ3MJ40 725 aa20.52■□□□□ 0.88
CHTOP-205ENST00000403433 METTL16Q86W50 562 aaKnown RBP20.52■□□□□ 0.88
CHTOP-205ENST00000403433 ELOA2Q8IYF1 753 aaPredicted RBP20.52■□□□□ 0.88
CHTOP-205ENST00000403433 MKRN1Q9UHC7 482 aaKnown RBP20.52■□□□□ 0.88
CHTOP-205ENST00000403433 SRPRBQ9Y5M8 271 aaKnown RBP20.52■□□□□ 0.88
CHTOP-205ENST00000403433 SPECC1Q5M775 1068 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 CERS3Q8IU89 383 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 UQCRHLA0A096LP55 91 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 UQCRHP07919 91 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 PPP4CP60510 307 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 TFAP4Q01664 338 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 SRBD1Q8N5C6 995 aaKnown RBP20.51■□□□□ 0.87
CHTOP-205ENST00000403433 CD209Q9NNX6 404 aa20.51■□□□□ 0.87
CHTOP-205ENST00000403433 MORC2Q9Y6X9 1032 aaPredicted RBP20.51■□□□□ 0.87
CHTOP-205ENST00000403433 CDK5RAP2Q96SN8 1893 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 IKBKBO14920 756 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 NEMFO60524 1076 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 BMP15O95972 392 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 GRIN1Q05586 938 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 GRIK5Q16478 980 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 ISM2Q6H9L7 571 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 MKNK2Q9HBH9 465 aa20.5■□□□□ 0.87
CHTOP-205ENST00000403433 BBOX1O75936 387 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 CCDC178Q5BJE1 867 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 RCSD1Q6JBY9 416 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 TGFBRAP1Q8WUH2 860 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 CACTINQ8WUQ7 758 aaKnown RBP20.49■□□□□ 0.87
CHTOP-205ENST00000403433 FAM205CA6NFA0 338 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 SMC2O95347 1197 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 SCG2P13521 617 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 DGKHQ86XP1 1220 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 DYNLL2Q96FJ2 89 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 PRIMPOLQ96LW4 560 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 QTRT2Q9H974 415 aaKnown RBP20.49■□□□□ 0.87
CHTOP-205ENST00000403433 BRWD3Q6RI45 1802 aa20.49■□□□□ 0.87
CHTOP-205ENST00000403433 POLR2DO15514 142 aaKnown RBP20.48■□□□□ 0.87
CHTOP-205ENST00000403433 IL1R1P14778 569 aa20.48■□□□□ 0.87
CHTOP-205ENST00000403433 NCAPHQ15003 741 aa20.48■□□□□ 0.87
CHTOP-205ENST00000403433 RTFDC1Q9BY42 306 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-205ENST00000403433 LRRC37AA6NMS7 1700 aa20.48■□□□□ 0.87
CHTOP-205ENST00000403433 POSTNQ15063 836 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 PFKFB3Q16875 520 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-205ENST00000403433 LRRC8AQ8IWT6 810 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 PCDHA5Q9Y5H7 936 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 TSPY3P0CV98 308 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 TSPY8P0CW00 308 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 HOXA10P31260 410 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-205ENST00000403433 BTDP43251 543 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 GSDMDP57764 484 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 NLRP5P59047 1200 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 MYL5Q02045 173 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 DDR1Q08345 913 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 EARS2Q5JPH6 523 aaKnown RBP20.47■□□□□ 0.87
CHTOP-205ENST00000403433 KANK3Q6NY19 840 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 FILIP1Q7Z7B0 1213 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 ANKS1AQ92625 1134 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 TNFRSF25Q93038 417 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 ZNF287Q9HBT7 754 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 IFNKQ9P0W0 207 aa20.47■□□□□ 0.87
CHTOP-205ENST00000403433 DDX60LQ5H9U9 1706 aaKnown RBP20.46■□□□□ 0.87
CHTOP-205ENST00000403433 TRIM37O94972 964 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 MDM2Q00987 491 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-205ENST00000403433 NPY5RQ15761 445 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 TTC38Q5R3I4 469 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 KRT27Q7Z3Y8 459 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 MAPKAPK5Q8IW41 473 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 ZNF444Q8N0Y2 327 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-205ENST00000403433 FERMT2Q96AC1 680 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 CRAMP1Q96RY5 1269 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 XPO4Q9C0E2 1151 aaKnown RBP20.46■□□□□ 0.87
CHTOP-205ENST00000403433 IL17RBQ9NRM6 502 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 PODXL2Q9NZ53 605 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 IMPACTQ9P2X3 320 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 SERTAD1Q9UHV2 236 aa20.46■□□□□ 0.87
CHTOP-205ENST00000403433 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
CHTOP-205ENST00000403433 PLCG2P16885 1265 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 SLF2Q8IX21 1173 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 CCDC34Q96HJ3 373 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 SAP30BPQ9UHR5 308 aaKnown RBP20.45■□□□□ 0.86
CHTOP-205ENST00000403433 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 FOXN1O15353 648 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 LMOD1P29536 600 aaPredicted RBP20.45■□□□□ 0.86
CHTOP-205ENST00000403433 GNAQP50148 359 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 TBC1D22AQ8WUA7 517 aa20.45■□□□□ 0.86
CHTOP-205ENST00000403433 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms