RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HTTP42858 3142 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 MYH1P12882 1939 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZSWIM8A7E2V4 1837 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 PHIPQ8WWQ0 1821 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 ATAD5Q96QE3 1844 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 CTNND1O60716 968 aaKnown RBP7□□□□□ -1.29
HMGB1P20-201ENST00000402555 PTPRAP18433 802 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 USP5P45974 858 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 JAG1P78504 1218 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 NBR1Q14596 966 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 NOM1Q5C9Z4 860 aaKnown RBP7□□□□□ -1.29
HMGB1P20-201ENST00000402555 SLC9C2Q5TAH2 1124 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 GADL1Q6ZQY3 521 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 ANKK1Q8NFD2 765 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7□□□□□ -1.29
HMGB1P20-201ENST00000402555 RIOK1Q9BRS2 568 aaKnown RBP7□□□□□ -1.29
HMGB1P20-201ENST00000402555 DNAJC18Q9H819 358 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZFYVE28Q9HCC9 887 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 PAG1Q9NWQ8 432 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 TRIM17Q9Y577 477 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 KIAA0100Q14667 2235 aaKnown RBP7□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZNF532Q9HCE3 1301 aa7□□□□□ -1.29
HMGB1P20-201ENST00000402555 PTPRFP10586 1907 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 MAGEB6P1A0A0J9YX57 407 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 TCRBV5S4A2TA0A5A2 114 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 TRIM75PA6NK02 468 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 PDHXO00330 501 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 GDF11O95390 407 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 CYP2C8P10632 490 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 ATP5JP18859 108 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 CAP2P40123 477 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 SOX10P56693 466 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 SP3Q02447 781 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 TTF1Q15361 905 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 GPAT2Q6NUI2 795 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 OTOP1Q7RTM1 612 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 ANKRD23Q86SG2 305 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 LCORLQ8N3X6 602 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 CRACR2BQ8N4Y2 399 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 OTUD7AQ8TE49 926 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZFRQ96KR1 1074 aaKnown RBP6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 HAUS7Q99871 368 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 ARHGAP39Q9C0H5 1083 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 DHX36Q9H2U1 1008 aaKnown RBP6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 ARMT1Q9H993 441 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 PI4KBQ9UBF8 816 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 CPA4Q9UI42 421 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 HPS5Q9UPZ3 1129 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 AFG3L2Q9Y4W6 797 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 PDE4DIPQ5VU43 2346 aa6.99□□□□□ -1.29
HMGB1P20-201ENST00000402555 NAV1Q8NEY1 1877 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 MYH7P12883 1935 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 A0A0G2JLL6 359 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 SOWAHBA6NEL2 793 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 CXCL11O14625 94 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 MAP3K7O43318 606 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 PRKAB2O43741 272 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 TLR2O60603 784 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 IGSF3O75054 1194 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 MBD4O95243 580 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 CYP2D6P10635 497 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 SPP2Q13103 211 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 TSR1Q2NL82 804 aaKnown RBP6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 TREML2Q5T2D2 321 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 FBXO46Q6PJ61 603 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 PRRT2Q7Z6L0 340 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 SDR42E1Q8WUS8 393 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 ERO1AQ96HE7 468 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 TRIM34Q9BYJ4 488 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 EFCC1Q9HA90 598 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 HERC5Q9UII4 1024 aaKnown RBP6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 ADGRA2Q96PE1 1338 aa6.98□□□□□ -1.29
HMGB1P20-201ENST00000402555 USP17L5A8MUK1 530 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 SMIM22K7EJ46 135 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 HLA-DOAP06340 250 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 CTGFP29279 349 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 ADD2P35612 726 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 PLCD1P51178 756 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 HMGCS2P54868 508 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 PKN2Q16513 984 aaKnown RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 DDX60LQ5H9U9 1706 aaKnown RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 C17orf99Q6UX52 265 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 FOXP4Q8IVH2 680 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 EXOC6Q8TAG9 804 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 CRNKL1Q9BZJ0 848 aaKnown RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZCCHC17Q9NP64 241 aaKnown RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 SEPT9Q9UHD8 586 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZBTB21Q9ULJ3 1066 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 PTPN22Q9Y2R2 807 aa6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 BAZ2AQ9UIF9 1905 aaKnown RBP6.97□□□□□ -1.29
HMGB1P20-201ENST00000402555 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 GH2P01242 217 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 LACTBP83111 547 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 MTMR2Q13614 643 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 ANKRD45Q5TZF3 282 aa6.96□□□□□ -1.3
HMGB1P20-201ENST00000402555 FASTKD5Q7L8L6 764 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms