RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 ANKRD13AQ8IZ07 590 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 APPBP2Q92624 585 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 RILPL2Q969X0 211 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 HOOK2Q96ED9 719 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 DNAJC18Q9H819 358 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 CSADQ9Y600 493 aa10.06□□□□□ -0.8
BRCC3-205ENST00000399026 PTPRFP10586 1907 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 A0A0D9SFI3 127 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 GPAA1O43292 621 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 HSPA1AP0DMV8 641 aaKnown RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 HSPA1BP0DMV9 641 aaKnown RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CYP2D6P10635 497 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 GSPT1P15170 499 aaKnown RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 NOGQ13253 232 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 SHROOM1Q2M3G4 852 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CCDC129Q6ZRS4 1044 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CENPQQ7L2Z9 268 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CCDC84Q86UT8 332 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CRACR2BQ8N4Y2 399 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 EVI5LQ96CN4 794 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 OPTNQ96CV9 577 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 SLC10A4Q96EP9 437 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 DCP1AQ9NPI6 582 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-205ENST00000399026 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
BRCC3-205ENST00000399026 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 PHF20L1A8MW92 1017 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 SMIM22K7EJ46 135 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 GDF11O95390 407 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 HLA-DOAP06340 250 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 ZFYP08048 801 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-205ENST00000399026 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
BRCC3-205ENST00000399026 ZMYM1Q5SVZ6 1142 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 TTC22Q5TAA0 569 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 SPRYD7Q5W111 196 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 DHX36Q9H2U1 1008 aaKnown RBP10.04□□□□□ -0.8
BRCC3-205ENST00000399026 EPB41L4AQ9HCS5 686 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-205ENST00000399026 MCM9Q9NXL9 1143 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 LAMA4Q16363 1823 aa10.04□□□□□ -0.8
BRCC3-205ENST00000399026 LOC285556D6RIA3 1793 aa10.03□□□□□ -0.8
BRCC3-205ENST00000399026 POLR3DP05423 398 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-205ENST00000399026 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-205ENST00000399026 PLCB2Q00722 1185 aa10.03□□□□□ -0.8
BRCC3-205ENST00000399026 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-205ENST00000399026 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
BRCC3-205ENST00000399026 NOL9Q5SY16 702 aaKnown RBP10.03□□□□□ -0.8
BRCC3-205ENST00000399026 SCYL3Q8IZE3 742 aa10.03□□□□□ -0.8
BRCC3-205ENST00000399026 STRBPQ96SI9 672 aaKnown RBP10.03□□□□□ -0.8
BRCC3-205ENST00000399026 ZNF112Q9UJU3 913 aa10.03□□□□□ -0.8
BRCC3-205ENST00000399026 SPDYE5A6NIY4 337 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 ZBTB48P10074 688 aaPredicted RBP10.02□□□□□ -0.81
BRCC3-205ENST00000399026 MAP2K2P36507 400 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 PLCD1P51178 756 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 ZNF589Q86UQ0 364 aaPredicted RBP10.02□□□□□ -0.81
BRCC3-205ENST00000399026 SLC44A5Q8NCS7 719 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 DYNLL2Q96FJ2 89 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 PI4KBQ9UBF8 816 aa10.02□□□□□ -0.81
BRCC3-205ENST00000399026 HERC5Q9UII4 1024 aaKnown RBP10.02□□□□□ -0.81
BRCC3-205ENST00000399026 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 SMAPO00193 183 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 IRF6O14896 467 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 FOXN1O15353 648 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 FOXP2O15409 715 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 SDSP20132 328 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 SHMT1P34896 483 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 TDO2P48775 406 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 JAG1P78504 1218 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 MAP2K1Q02750 393 aaPredicted RBP10.01□□□□□ -0.81
BRCC3-205ENST00000399026 MAP3K10Q02779 954 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 PPIL2Q13356 520 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 VPS53Q5VIR6 699 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 ERO1BQ86YB8 467 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 EHD4Q9H223 541 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
BRCC3-205ENST00000399026 PICK1Q9NRD5 415 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 DIAPH3Q9NSV4 1193 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 ATP8A2Q9NTI2 1148 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 WBP1LQ9NX94 342 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 SERPINB13Q9UIV8 391 aa10.01□□□□□ -0.81
BRCC3-205ENST00000399026 GREB1LQ9C091 1923 aaPredicted RBP10.01□□□□□ -0.81
BRCC3-205ENST00000399026 CCL15-CCL14A0A0B4J2E2 113 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 TRIM75PA6NK02 468 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 USP17L12C9JPN9 530 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 USP17L21D6R901 530 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 IGF2BP3O00425 579 aaKnown RBP eCLIP10□□□□□ -0.81
BRCC3-205ENST00000399026 CTNND1O60716 968 aaKnown RBP10□□□□□ -0.81
BRCC3-205ENST00000399026 APPP05067 770 aa10□□□□□ -0.81
BRCC3-205ENST00000399026 PTPRAP18433 802 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms