RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 TMEM67Q5HYA8 995 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 SYNE3Q6ZMZ3 975 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 NFXL1Q6ZNB6 911 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 MCM9Q9NXL9 1143 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 NEDD4P46934 1319 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 PLCD1P51178 756 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 RESTQ13127 1097 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 ATL3Q6DD88 541 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 TMTC2Q8N394 836 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 RGS22Q8NE09 1264 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 IGDCC4Q8TDY8 1250 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 ANP32BQ92688 251 aaKnown RBP21.34■■□□□ 1.01
MBD1-208ENST00000398493 CDCA5Q96FF9 252 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 TOMM22Q9NS69 142 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 ANAPC4Q9UJX5 808 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 FZD1Q9UP38 647 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 HPS5Q9UPZ3 1129 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 ERICH2A1L162 156 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 GOLGA6L4A6NEF3 574 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 IFIT3O14879 490 aaKnown RBP21.33■■□□□ 1.01
MBD1-208ENST00000398493 PPARAQ07869 468 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 CCDC183Q5T5S1 534 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 CTR9Q6PD62 1173 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 ZSCAN29Q8IWY8 852 aaPredicted RBP21.33■■□□□ 1.01
MBD1-208ENST00000398493 RBM46Q8TBY0 533 aaKnown RBP21.33■■□□□ 1.01
MBD1-208ENST00000398493 SPATA32Q96LK8 384 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 ZSWIM5Q9P217 1185 aa21.33■■□□□ 1.01
MBD1-208ENST00000398493 USP17L12C9JPN9 530 aa21.32■■□□□ 1
MBD1-208ENST00000398493 USP17L21D6R901 530 aa21.32■■□□□ 1
MBD1-208ENST00000398493 KDM4AO75164 1064 aa21.32■■□□□ 1
MBD1-208ENST00000398493 METAP2P50579 478 aaKnown RBP eCLIP21.32■■□□□ 1
MBD1-208ENST00000398493 SGMS1Q86VZ5 419 aa21.32■■□□□ 1
MBD1-208ENST00000398493 SMC1BQ8NDV3 1235 aa21.32■■□□□ 1
MBD1-208ENST00000398493 PPP2R3BQ9Y5P8 575 aa21.32■■□□□ 1
MBD1-208ENST00000398493 SYCE3A1L190 88 aa21.32■■□□□ 1
MBD1-208ENST00000398493 CCDC69A6NI79 296 aa21.32■■□□□ 1
MBD1-208ENST00000398493 PCP11498 1178 aaKnown RBP21.32■■□□□ 1
MBD1-208ENST00000398493 CSRNP1Q96S65 589 aa21.32■■□□□ 1
MBD1-208ENST00000398493 ORC3Q9UBD5 711 aaPredicted RBP21.32■■□□□ 1
MBD1-208ENST00000398493 ATRNL1Q5VV63 1379 aa21.31■■□□□ 1
MBD1-208ENST00000398493 SSC5DA1L4H1 1573 aa21.31■■□□□ 1
MBD1-208ENST00000398493 FOCADQ5VW36 1801 aa21.31■■□□□ 1
MBD1-208ENST00000398493 MINDY4BA8MYZ0 360 aa21.31■■□□□ 1
MBD1-208ENST00000398493 ZBTB43O43298 467 aa21.31■■□□□ 1
MBD1-208ENST00000398493 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
MBD1-208ENST00000398493 ZNF396Q96N95 335 aaPredicted RBP21.31■■□□□ 1
MBD1-208ENST00000398493 APOA5Q6Q788 366 aa21.3■■□□□ 1
MBD1-208ENST00000398493 MIGA2Q7L4E1 593 aa21.3■■□□□ 1
MBD1-208ENST00000398493 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
MBD1-208ENST00000398493 ESR2Q92731 530 aa21.3■■□□□ 1
MBD1-208ENST00000398493 LY9Q9HBG7 655 aa21.3■■□□□ 1
MBD1-208ENST00000398493 SLC12A7Q9Y666 1083 aa21.3■■□□□ 1
MBD1-208ENST00000398493 FAM196BA6NMK8 535 aa21.29■■□□□ 1
MBD1-208ENST00000398493 POLR3DP05423 398 aaPredicted RBP21.29■■□□□ 1
MBD1-208ENST00000398493 TTC6Q86TZ1 520 aa21.29■■□□□ 1
MBD1-208ENST00000398493 C8orf76Q96K31 380 aa21.29■■□□□ 1
MBD1-208ENST00000398493 ZNF408Q9H9D4 720 aa21.29■■□□□ 1
MBD1-208ENST00000398493 TFIP11Q9UBB9 837 aaKnown RBP21.29■■□□□ 1
MBD1-208ENST00000398493 PASKQ96RG2 1323 aa21.29■■□□□ 1
MBD1-208ENST00000398493 FDPSP14324 419 aaKnown RBP21.29■■□□□ 1
MBD1-208ENST00000398493 NASPP49321 788 aaPredicted RBP21.29■■□□□ 1
MBD1-208ENST00000398493 PRKG1Q13976 671 aa21.29■■□□□ 1
MBD1-208ENST00000398493 C12orf60Q5U649 245 aa21.29■■□□□ 1
MBD1-208ENST00000398493 FAM173BQ6P4H8 233 aa21.29■■□□□ 1
MBD1-208ENST00000398493 DHX36Q9H2U1 1008 aaKnown RBP21.29■■□□□ 1
MBD1-208ENST00000398493 INCENPQ9NQS7 918 aa21.29■■□□□ 1
MBD1-208ENST00000398493 BAZ2AQ9UIF9 1905 aaKnown RBP21.29■■□□□ 1
MBD1-208ENST00000398493 WTAPQ15007 396 aa21.28■■□□□ 1
MBD1-208ENST00000398493 CST9Q5W186 159 aa21.28■■□□□ 1
MBD1-208ENST00000398493 LEO1Q8WVC0 666 aaPredicted RBP21.28■■□□□ 1
MBD1-208ENST00000398493 DYNLL2Q96FJ2 89 aa21.28■■□□□ 1
MBD1-208ENST00000398493 DNAJC18Q9H819 358 aa21.28■■□□□ 1
MBD1-208ENST00000398493 PI4KBQ9UBF8 816 aa21.28■■□□□ 1
MBD1-208ENST00000398493 DDX60LQ5H9U9 1706 aaKnown RBP21.28■■□□□ 1
MBD1-208ENST00000398493 COL2A1P02458 1487 aaPredicted RBP21.28■■□□□ 1
MBD1-208ENST00000398493 GOLGA8AA7E2F4 631 aa21.27■■□□□ 1
MBD1-208ENST00000398493 SLC3A2P08195 630 aaKnown RBP21.27■■□□□ 1
MBD1-208ENST00000398493 SBK1Q52WX2 424 aa21.27■■□□□ 1
MBD1-208ENST00000398493 MOB2Q70IA6 237 aa21.27■■□□□ 1
MBD1-208ENST00000398493 STK11IPQ8N1F8 1099 aa21.27■■□□□ 1
MBD1-208ENST00000398493 UBAC1Q9BSL1 405 aa21.27■■□□□ 1
MBD1-208ENST00000398493 TSPY26PQ9H489 355 aa21.27■■□□□ 1
MBD1-208ENST00000398493 FOSBP53539 338 aa21.27■□□□□ 0.99
MBD1-208ENST00000398493 PANK2Q9BZ23 570 aa21.27■□□□□ 0.99
MBD1-208ENST00000398493 ARPP21Q9UBL0 812 aaPredicted RBP21.27■□□□□ 0.99
MBD1-208ENST00000398493 TACC3Q9Y6A5 838 aa21.27■□□□□ 0.99
MBD1-208ENST00000398493 NAV1Q8NEY1 1877 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 CELF2O95319 508 aaKnown RBP21.26■□□□□ 0.99
MBD1-208ENST00000398493 RCAN1P53805 252 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 SUPT20HL1Q3ZLR7 823 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 TPRNQ4KMQ1 711 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 MICU3Q86XE3 530 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 RAB11FIP4Q86YS3 637 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 SLC44A5Q8NCS7 719 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 MYH1P12882 1939 aa21.26■□□□□ 0.99
MBD1-208ENST00000398493 CCDC196A0A1B0GTZ2 297 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 HLA-DOAP06340 250 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 MAP3K10Q02779 954 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 GABPAQ06546 454 aa21.25■□□□□ 0.99
MBD1-208ENST00000398493 FSTL1Q12841 308 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms