RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 GTF2IP78347 998 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 XPCQ01831 940 aaPredicted RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 DCTN1Q14203 1278 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 SLC5A9Q2M3M2 681 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 MAP9Q49MG5 647 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 GDF6Q6KF10 455 aaPredicted RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 MICALCLQ6ZW33 695 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 CEP57Q86XR8 500 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 TRIM50Q86XT4 487 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 SLC9A9Q8IVB4 645 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 PLEKHM2Q8IWE5 1019 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 NME8Q8N427 588 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 FBXL6Q8N531 539 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 ZNF280CQ8ND82 737 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 GLIS3Q8NEA6 775 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 PMFBP1Q8TBY8 1022 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 SMCR8Q8TEV9 937 aaPredicted RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 ANKRD24Q8TF21 1146 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 MIEF2Q96C03 454 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 ERO1AQ96HE7 468 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 CCDC34Q96HJ3 373 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 CDK5RAP3Q96JB5 506 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 TBC1D32Q96NH3 1257 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 TMPRSS5Q9H3S3 457 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 TONSLQ96HA7 1378 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 MAP3K5Q99683 1374 aa4.17□□□□□ -1.74
XRCC4-203ENST00000396027 SCAF11Q99590 1463 aaKnown RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 SPAG9O60271 1321 aaKnown RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 ATXN2Q99700 1313 aaKnown RBP4.17□□□□□ -1.74
XRCC4-203ENST00000396027 ENO4A6NNW6 628 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 IPO5O00410 1097 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 TPD52L2O43399 206 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 EPB41L2O43491 1005 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 CAVIN2O95810 425 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ACTN2P35609 894 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 DEUP1Q05D60 604 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 NCOA4Q13772 614 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 KRT72Q14CN4 511 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 RAB3GAP1Q15042 981 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 PPP2R5AQ15172 486 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 SLC4A8Q2Y0W8 1093 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 C1QTNF12Q5T7M4 302 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ZKSCAN2Q63HK3 967 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 RCSD1Q6JBY9 416 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 LRSAM1Q6UWE0 723 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 STK11IPQ8N1F8 1099 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 CCDC112Q8NEF3 446 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MAGEC3Q8TD91 643 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MORC4Q8TE76 937 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 JAKMIP2Q96AA8 810 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 PLD4Q96BZ4 506 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 UIMC1Q96RL1 719 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MAK16Q9BXY0 300 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ADAM19Q9H013 955 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 LUC7LQ9NQ29 371 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 C11orf16Q9NQ32 467 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 GNL3LQ9NVN8 582 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 TPX2Q9ULW0 747 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 SLC5A6Q9Y289 635 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 THRAP3Q9Y2W1 955 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 PPME1Q9Y570 386 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 AKNAQ7Z591 1439 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 KIF27Q86VH2 1401 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 SETD5Q9C0A6 1442 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 NCOA3Q9Y6Q9 1424 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 TOP2AP11388 1531 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MAP3K1Q13233 1512 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 U2SURPO15042 1029 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ERC2O15083 957 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 CHUKO15111 745 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 SNUPNO95149 360 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 EPB42P16452 691 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 U2AF2P26368 475 aaKnown RBP eCLIP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MAP4P27816 1152 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 SSFA2P28290 1259 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 FLT3P36888 993 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 TRPC1P48995 793 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 EPHA4P54764 986 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 CORO7P57737 925 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MLLT1Q03111 559 aaPredicted RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 PSME1Q06323 249 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 SF3A1Q15459 793 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 DUOXA2Q1HG44 320 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 C10orf67Q8IYJ2 551 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ACRBPQ8NEB7 543 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ADAMTS19Q8TE59 1207 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 PNISRQ8TF01 805 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 TNPO1Q92973 898 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ANKRD27Q96NW4 1050 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 OSBPL9Q96SU4 736 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MOV10L1Q9BXT6 1211 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 PHACTR1Q9C0D0 580 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 BHMT2Q9H2M3 363 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 ATP8A1Q9Y2Q0 1164 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 RRP15Q9Y3B9 282 aaKnown RBP4.16□□□□□ -1.74
XRCC4-203ENST00000396027 RPS6KL1Q9Y6S9 549 aa4.16□□□□□ -1.74
XRCC4-203ENST00000396027 MYOM3Q5VTT5 1437 aa4.15□□□□□ -1.74
XRCC4-203ENST00000396027 PTPRCP08575 1304 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms