RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 SH3BGRP55822 239 aaPredicted RBP19.11■□□□□ 0.65
SIN3A-203ENST00000394949 KLHL30Q0D2K2 578 aa19.11■□□□□ 0.65
SIN3A-203ENST00000394949 BTG4Q9NY30 223 aa19.11■□□□□ 0.65
SIN3A-203ENST00000394949 KDM5AP29375 1690 aaKnown RBP19.1■□□□□ 0.65
SIN3A-203ENST00000394949 LIG3P49916 1009 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 VCX3BQ9H321 246 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 GJC1P36383 396 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 GKAP1Q5VSY0 366 aaPredicted RBP19.1■□□□□ 0.65
SIN3A-203ENST00000394949 MSANTD4Q8NCY6 345 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 USP44Q9H0E7 712 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 A0A087WUV0 522 aaPredicted RBP19.1■□□□□ 0.65
SIN3A-203ENST00000394949 RNASE9P60153 205 aaKnown RBP19.1■□□□□ 0.65
SIN3A-203ENST00000394949 ZNF365Q70YC5 407 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 KIFAP3Q92845 792 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 CALUO43852 315 aaPredicted RBP19.1■□□□□ 0.65
SIN3A-203ENST00000394949 RNF40O75150 1001 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 ERCC5P28715 1186 aaPredicted RBP19.1■□□□□ 0.65
SIN3A-203ENST00000394949 TRAPPC3LQ5T215 181 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 PHKBQ93100 1093 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 MCUR1Q96AQ8 359 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 XAGE2Q96GT9 111 aa19.1■□□□□ 0.65
SIN3A-203ENST00000394949 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 PARP1P09874 1014 aaKnown RBP19.09■□□□□ 0.65
SIN3A-203ENST00000394949 HSPA2P54652 639 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 DENND2CQ68D51 928 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 NOSTRINQ8IVI9 506 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 STK24Q9Y6E0 443 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 NDC80O14777 642 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 CTNNA1P35221 906 aaKnown RBP19.09■□□□□ 0.65
SIN3A-203ENST00000394949 BEND3Q5T5X7 828 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 PPANQ9NQ55 473 aaKnown RBP19.09■□□□□ 0.65
SIN3A-203ENST00000394949 KDM5CP41229 1560 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 H7C1D1 291 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 KRT25Q7Z3Z0 450 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 PEX26Q7Z412 305 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 RNF10Q8N5U6 811 aaKnown RBP19.09■□□□□ 0.65
SIN3A-203ENST00000394949 FAM204AQ9H8W3 233 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 VEZTQ9HBM0 779 aa19.09■□□□□ 0.65
SIN3A-203ENST00000394949 PUM3Q15397 648 aaKnown RBP19.08■□□□□ 0.65
SIN3A-203ENST00000394949 HAUS3Q68CZ6 603 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 PPP1R12CQ9BZL4 782 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 PDE8AO60658 829 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 INF2Q27J81 1249 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 MAP4K1Q92918 833 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 TCHPQ9BT92 498 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 GLT8D2Q9H1C3 349 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 HOMER3Q9NSC5 361 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 ARHGEF10O15013 1369 aa19.08■□□□□ 0.65
SIN3A-203ENST00000394949 NDUFA8P51970 172 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 TERF2Q15554 542 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 PDLIM2Q96JY6 352 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 GDAP1L1Q96MZ0 367 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 GCKRQ14397 625 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 CCDC62Q6P9F0 684 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.64
SIN3A-203ENST00000394949 KIF3CO14782 793 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 GNPATO15228 680 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 MORC3Q14149 939 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 MAP7D1Q3KQU3 841 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 SLFNL1Q499Z3 407 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 TXNDC16Q9P2K2 825 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 MAGI2Q86UL8 1455 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 A0A0D9SFI3 127 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 CLGNO14967 610 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 ITGA6P23229 1130 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 PHLDB2Q86SQ0 1253 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 GNA14O95837 355 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 CNBD1Q8NA66 436 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 RAB3IPQ96QF0 476 aaPredicted RBP19.07■□□□□ 0.64
SIN3A-203ENST00000394949 PSMB7Q99436 277 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 TRIM31Q9BZY9 425 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 EPN1Q9Y6I3 576 aaPredicted RBP19.07■□□□□ 0.64
SIN3A-203ENST00000394949 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 RGS16O15492 202 aaPredicted RBP19.07■□□□□ 0.64
SIN3A-203ENST00000394949 TYW1BQ6NUM6 668 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 CERS3Q8IU89 383 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 KLHDC4Q8TBB5 520 aa19.07■□□□□ 0.64
SIN3A-203ENST00000394949 CLCN6P51797 869 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 MAIP1Q8WWC4 291 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 CCDC97Q96F63 343 aaPredicted RBP19.06■□□□□ 0.64
SIN3A-203ENST00000394949 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 POLD1P28340 1107 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 HIBADHP31937 336 aaKnown RBP19.06■□□□□ 0.64
SIN3A-203ENST00000394949 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 TEX11Q8IYF3 940 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 RBM17Q96I25 401 aaKnown RBP19.06■□□□□ 0.64
SIN3A-203ENST00000394949 NONOQ15233 471 aaKnown RBP eCLIP19.06■□□□□ 0.645e-7■■■■■ 27.1
SIN3A-203ENST00000394949 CFAP157Q5JU67 520 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 ARHGEF2Q92974 986 aaKnown RBP19.06■□□□□ 0.64
SIN3A-203ENST00000394949 CLEC17AQ6ZS10 378 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 RRAGAQ7L523 313 aa19.06■□□□□ 0.64
SIN3A-203ENST00000394949 ERBB4Q15303 1308 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 HIP1RO75146 1068 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 CCT5P48643 541 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 FBXO18Q8NFZ0 1043 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 MIPOL1Q8TD10 442 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 MICAL1Q8TDZ2 1067 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 SLC52A2Q9HAB3 445 aa19.05■□□□□ 0.64
SIN3A-203ENST00000394949 POLR3EQ9NVU0 708 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms