RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 hCG_1642624A0A1W2PR95 340 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 PES1O00541 588 aaKnown RBP18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 SGMS1Q86VZ5 419 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 CHP1Q99653 195 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 BLZF1Q9H2G9 400 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 MED4Q9NPJ6 270 aa18.57■□□□□ 0.56
EFEMP1-202ENST00000394555 RPS6KA5O75582 802 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 IFNAR1P17181 557 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 KRT9P35527 623 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 TUBB4BP68371 445 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 CDKAL1Q5VV42 579 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 GSPT2Q8IYD1 628 aaKnown RBP18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 SYNE4Q8N205 404 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 SPATA20Q8TB22 786 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 FOXP1Q9H334 677 aaPredicted RBP18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 RABEP2Q9H5N1 569 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 JRKLQ9Y4A0 524 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 DPYDQ12882 1025 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 KRT31Q15323 416 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 DRC1Q96MC2 740 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 NAPBQ9H115 298 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 CEP131Q9UPN4 1083 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 MAPK8IP1Q9UQF2 711 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 MYH8P13535 1937 aa18.56■□□□□ 0.56
EFEMP1-202ENST00000394555 CHRNA2Q15822 529 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 CYP26C1Q6V0L0 522 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 ZNF579Q8NAF0 562 aaKnown RBP18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 STRN4Q9NRL3 753 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 MEGF6O75095 1541 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 PPP1R3GB7ZBB8 358 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 SYF2O95926 243 aaKnown RBP18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 LDHAL6AQ6ZMR3 332 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 PDE6AP16499 860 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 CORO7P57737 925 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 RRAGBQ5VZM2 374 aa18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
EFEMP1-202ENST00000394555 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 PPM1EQ8WY54 764 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 CCDC51Q96ER9 411 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 MMS19Q96T76 1030 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 TACC3Q9Y6A5 838 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 STK36Q9NRP7 1315 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 LIFRP42702 1097 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 CNNM1Q9NRU3 951 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
EFEMP1-202ENST00000394555 TRIM75PA6NK02 468 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 AMPD2Q01433 879 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 RGPD5Q99666 1765 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 SLIT3O75094 1523 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 PPFIA4O75335 1185 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 WTAPQ15007 396 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 WDR93Q6P2C0 686 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 MFSD6Q6ZSS7 791 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 VPS54Q9P1Q0 977 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 EPN1Q9Y6I3 576 aaPredicted RBP18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 MAP3K15Q6ZN16 1313 aa18.53■□□□□ 0.56
EFEMP1-202ENST00000394555 DEXIO95424 95 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 ATP1A1P05023 1023 aaKnown RBP18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 DNAJC21Q5F1R6 531 aaKnown RBP18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 EARS2Q5JPH6 523 aaKnown RBP18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 IFNL3Q8IZI9 196 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 MICALL1Q8N3F8 863 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 CRACR2BQ8N4Y2 399 aaPredicted RBP18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 ARMT1Q9H993 441 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 SPEF2Q9C093 1822 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 PRDM1O75626 825 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 MBD4O95243 580 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 TUBBP07437 444 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 GGCXP38435 758 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 USP14P54578 494 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 UBXN1Q04323 297 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 STIM1Q13586 685 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 ZNF174Q15697 407 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 EPB41L4AQ9HCS5 686 aaPredicted RBP18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 HPCAL4Q9UM19 191 aa18.52■□□□□ 0.56
EFEMP1-202ENST00000394555 PHKA1P46020 1223 aa18.52■□□□□ 0.55
EFEMP1-202ENST00000394555 CAGE1Q8TC20 777 aa18.52■□□□□ 0.55
EFEMP1-202ENST00000394555 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.55
EFEMP1-202ENST00000394555 ERICH2A1L162 156 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 PRKAB2O43741 272 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 NDUFA10O95299 355 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 COPB1P53618 953 aaKnown RBP18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 MYO1AQ9UBC5 1043 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 REXO2Q9Y3B8 237 aaKnown RBP18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 WNT7AO00755 349 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 TTF1Q15361 905 aaPredicted RBP18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 UBE3CQ15386 1083 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 CCDC122Q5T0U0 273 aa18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 AATFQ9NY61 560 aaKnown RBP eCLIP18.51■□□□□ 0.55
EFEMP1-202ENST00000394555 SAR1BQ9Y6B6 198 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms