RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 hCG_1642624A0A1W2PR95 340 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 RCAN1P53805 252 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 RESTQ13127 1097 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 RASGRP2Q7LDG7 609 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 CRACR2BQ8N4Y2 399 aaPredicted RBP14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 PNMA1Q8ND90 353 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 CEP95Q96GE4 821 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 TMEM47Q9BQJ4 181 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 ALG1Q9BT22 464 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 SCAF8Q9UPN6 1271 aaKnown RBP14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
SPTBN1-203ENST00000389980 CCDC196A0A1B0GTZ2 297 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 FIBPO43427 364 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 DDAH1O94760 285 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 FMNL1O95466 1100 aaPredicted RBP14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 EGFRP00533 1210 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 TNIP1Q15025 636 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 SHROOM1Q2M3G4 852 aaPredicted RBP14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 NBPF9Q3BBW0 867 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 RBM26Q5T8P6 1007 aaKnown RBP14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 USP48Q86UV5 1035 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 VEZTQ9HBM0 779 aa14.18□□□□□ -0.14
SPTBN1-203ENST00000389980 EIF6P56537 245 aaKnown RBP14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 ANKS1AQ92625 1134 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 DHX36Q9H2U1 1008 aaKnown RBP14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 TFIP11Q9UBB9 837 aaKnown RBP14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 PI4KBQ9UBF8 816 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 ZNF541Q9H0D2 1346 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 FZD9O00144 591 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 GADD45BO75293 160 aaPredicted RBP14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 CALM1P0DP23 149 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 CALM2P0DP24 149 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 CALM3P0DP25 149 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 SYT17Q9BSW7 474 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 MYOZ2Q9NPC6 264 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 TMOD2Q9NZR1 351 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 SWAP70Q9UH65 585 aa14.17□□□□□ -0.14
SPTBN1-203ENST00000389980 MPHOSPH10O00566 681 aaKnown RBP14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 WNT10BO00744 389 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 ENTPD3O75355 529 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 NT5C2P49902 561 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 GMPSP49915 693 aaPredicted RBP14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 FUT2Q10981 343 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 GLIPR1L2Q4G1C9 344 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 STAG2Q8N3U4 1231 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 SRBD1Q8N5C6 995 aaKnown RBP14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 PIBF1Q8WXW3 757 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 EHD4Q9H223 541 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 DDX49Q9Y6V7 483 aaKnown RBP14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 MYH15Q9Y2K3 1946 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 CCDC178Q5BJE1 867 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 TMTC3Q6ZXV5 915 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 GPT2Q8TD30 523 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 CSRNP1Q96S65 589 aa14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 RBM28Q9NW13 759 aaKnown RBP14.16□□□□□ -0.14
SPTBN1-203ENST00000389980 STK36Q9NRP7 1315 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 KIF28PB7ZC32 967 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 SBF1O95248 1867 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 GOLGA8HP0CJ92 632 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 PPP2R5BQ15173 497 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 KRT40Q6A162 431 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 SAMD7Q7Z3H4 446 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 ZBED3Q96IU2 234 aaPredicted RBP14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 MTMR4Q9NYA4 1195 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 V9GY48 417 aaPredicted RBP14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 CNTNAP1P78357 1384 aa14.15□□□□□ -0.14
SPTBN1-203ENST00000389980 CEBPZQ03701 1054 aaKnown RBP14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 MICALL2Q8IY33 904 aa14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 MTMR14Q8NCE2 650 aa14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 TRIM34Q9BYJ4 488 aa14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 FTOQ9C0B1 505 aaKnown RBP eCLIP14.15□□□□□ -0.156e-7■■□□□ 13.4
SPTBN1-203ENST00000389980 TMEM39BQ9GZU3 492 aa14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 ZSCAN16Q9H4T2 348 aaPredicted RBP14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 MAD2L2Q9UI95 211 aa14.15□□□□□ -0.15
SPTBN1-203ENST00000389980 ATRNL1Q5VV63 1379 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 MYH4Q9Y623 1939 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 GDF11O95390 407 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 DEXIO95424 95 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 PTMSP20962 102 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 PKN1Q16512 942 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 LRRC47Q8N1G4 583 aaKnown RBP14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 CPVLQ9H3G5 476 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 KCNJ14Q9UNX9 436 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 PLIN4Q96Q06 1357 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 DICER1Q9UPY3 1922 aaKnown RBP14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 ASTN2O75129 1339 aaPredicted RBP14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 CNTNAP5Q8WYK1 1306 aa14.14□□□□□ -0.15
SPTBN1-203ENST00000389980 YBX3P16989 372 aaKnown RBP eCLIP14.13□□□□□ -0.155e-7■■□□□ 12.2
SPTBN1-203ENST00000389980 KRT85P78386 507 aa14.13□□□□□ -0.15
SPTBN1-203ENST00000389980 ATP2B2Q01814 1243 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms