RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 BCRP11274 1271 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 RPS6KA1Q15418 735 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 SNX16P57768 344 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 EAF2Q96CJ1 260 aaPredicted RBP17.82■□□□□ 0.44
COL2A1-202ENST00000380518 PFKFB1P16118 471 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 DAAM2Q86T65 1068 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 DDX23Q9BUQ8 820 aaKnown RBP17.82■□□□□ 0.44
COL2A1-202ENST00000380518 TRIM31Q9BZY9 425 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 ASIC3Q9UHC3 531 aa17.82■□□□□ 0.44
COL2A1-202ENST00000380518 hCG_1642624A0A1W2PR95 340 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 RPGRIP1Q96KN7 1286 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 GABPB1Q06547 395 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-202ENST00000380518 PNOCQ13519 176 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 NOSTRINQ8IVI9 506 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 A0A0D9SFI3 127 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 FYB2Q5VWT5 728 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 ZSWIM6Q9HCJ5 1215 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 PFKFB2O60825 505 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 SMC1BQ8NDV3 1235 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 STMN2Q93045 179 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 TBC1D7Q9P0N9 293 aa17.81■□□□□ 0.44
COL2A1-202ENST00000380518 GCNT3O95395 438 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 MYCLP12524 364 aaPredicted RBP17.8■□□□□ 0.44
COL2A1-202ENST00000380518 USP28Q96RU2 1077 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 IFIH1Q9BYX4 1025 aaKnown RBP17.8■□□□□ 0.44
COL2A1-202ENST00000380518 PTH1RQ03431 593 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 PPFIA1Q13136 1202 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 ZYXQ15942 572 aaKnown RBP17.8■□□□□ 0.44
COL2A1-202ENST00000380518 TAF12Q16514 161 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 PEX26Q7Z412 305 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 KLHL7Q8IXQ5 586 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 TGFBRAP1Q8WUH2 860 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 MRPL44Q9H9J2 332 aaKnown RBP17.8■□□□□ 0.44
COL2A1-202ENST00000380518 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 KDRP35968 1356 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 FAM207AQ9NSI2 230 aaPredicted RBP17.8■□□□□ 0.44
COL2A1-202ENST00000380518 GNA14O95837 355 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 OR8K1Q8NGG5 319 aa17.8■□□□□ 0.44
COL2A1-202ENST00000380518 RPS8P62241 208 aaKnown RBP17.79■□□□□ 0.44
COL2A1-202ENST00000380518 USP17L12C9JPN9 530 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 USP17L21D6R901 530 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 PPP1R21Q6ZMI0 780 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 RRAGAQ7L523 313 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 TAOK1Q7L7X3 1001 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 RSRC1Q96IZ7 334 aaKnown RBP17.79■□□□□ 0.44
COL2A1-202ENST00000380518 PSMB7Q99436 277 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 SMCO2A6NFE2 343 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 CFBP00751 764 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 CTSWP56202 376 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 RAD51AP2Q09MP3 1159 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 FAM47AQ5JRC9 791 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 MAEAQ7L5Y9 396 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 MTMR3Q13615 1198 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 CDAN1Q8IWY9 1227 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 ATP8A2Q9NTI2 1148 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 ODF2LQ9ULJ1 636 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
COL2A1-202ENST00000380518 NOP56O00567 594 aaKnown RBP17.78■□□□□ 0.44
COL2A1-202ENST00000380518 CIB2O75838 187 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 RASA3Q14644 834 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 SND1Q7KZF4 910 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■■■ 27.7
COL2A1-202ENST00000380518 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 ERCC3P19447 782 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 CMA1P23946 247 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 HOOK2Q96ED9 719 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 ZBED4O75132 1171 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 USH1GQ495M9 461 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 BRDTQ58F21 947 aaPredicted RBP17.78■□□□□ 0.44
COL2A1-202ENST00000380518 NSMFQ6X4W1 530 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 GBP6Q6ZN66 633 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 CCDC117Q8IWD4 279 aaPredicted RBP17.78■□□□□ 0.44
COL2A1-202ENST00000380518 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 HAUS7Q99871 368 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 KCNG1Q9UIX4 513 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 PALD1Q9ULE6 856 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 KDM3AQ9Y4C1 1321 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 DDX39AO00148 427 aaKnown RBP17.78■□□□□ 0.44
COL2A1-202ENST00000380518 HSPD1P10809 573 aaKnown RBP17.78■□□□□ 0.44
COL2A1-202ENST00000380518 TYW1BQ6NUM6 668 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 IFNL3Q8IZI9 196 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 TRIML1Q8N9V2 468 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 FANCBQ8NB91 859 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 NLRC4Q9NPP4 1024 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 SAR1BQ9Y6B6 198 aa17.78■□□□□ 0.44
COL2A1-202ENST00000380518 NR1I2O75469 434 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 INPP5BP32019 993 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 ABCC2Q92887 1545 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 STK10O94804 968 aaKnown RBP17.77■□□□□ 0.44
COL2A1-202ENST00000380518 PDE6AP16499 860 aa17.77■□□□□ 0.44
COL2A1-202ENST00000380518 ADKP55263 362 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms