RNA–Protein interactions for RNA: ENST00000378863.8

CRLS1-201, Transcript of cardiolipin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLS1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-201ENST00000378863 KCNF1Q9H3M0 494 aa16.66■□□□□ 0.26
CRLS1-201ENST00000378863 BIN2Q9UBW5 565 aaPredicted RBP16.66■□□□□ 0.26
CRLS1-201ENST00000378863 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
CRLS1-201ENST00000378863 ASIC1P78348 528 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 TRIM47Q96LD4 638 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 CSRNP2Q9H175 543 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 ENAHQ8N8S7 591 aaPredicted RBP16.65■□□□□ 0.26
CRLS1-201ENST00000378863 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
CRLS1-201ENST00000378863 KIF2AO00139 706 aaPredicted RBP16.65■□□□□ 0.26
CRLS1-201ENST00000378863 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
CRLS1-201ENST00000378863 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
CRLS1-201ENST00000378863 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 SLF2Q8IX21 1173 aa16.65■□□□□ 0.26
CRLS1-201ENST00000378863 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 PUF60Q9UHX1 559 aaKnown RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 USP27XA6NNY8 438 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 WDHD1O75717 1129 aaPredicted RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 SLC16A2P36021 539 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 POSTNQ15063 836 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 USP40Q9NVE5 1235 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 ECM2O94769 699 aaPredicted RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 DTHD1Q6ZMT9 781 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 ZNHIT6Q9NWK9 470 aaKnown RBP16.64■□□□□ 0.25
CRLS1-201ENST00000378863 PKD2L1Q9P0L9 805 aa16.64■□□□□ 0.25
CRLS1-201ENST00000378863 KIF5CO60282 957 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 USP49Q70CQ1 688 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 PLA2G12BQ9BX93 195 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 HPS5Q9UPZ3 1129 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 USH1GQ495M9 461 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 FCHSD1Q86WN1 690 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 FEZ1Q99689 392 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 CUTAO60888 179 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 CALM1P0DP23 149 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 CALM2P0DP24 149 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 CALM3P0DP25 149 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 CMA1P23946 247 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 MTIF2P46199 727 aaKnown RBP16.63■□□□□ 0.25
CRLS1-201ENST00000378863 GPS2Q13227 327 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 HSP90B2PQ58FF3 399 aa16.63■□□□□ 0.25
CRLS1-201ENST00000378863 NOM1Q5C9Z4 860 aaKnown RBP16.63■□□□□ 0.25
CRLS1-201ENST00000378863 DCP1AQ9NPI6 582 aaPredicted RBP16.63■□□□□ 0.25
CRLS1-201ENST00000378863 HSPA1LP34931 641 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 ERCC6LQ2NKX8 1250 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
CRLS1-201ENST00000378863 THRAP3Q9Y2W1 955 aaKnown RBP16.62■□□□□ 0.25
CRLS1-201ENST00000378863 GRIN1Q05586 938 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 DYMQ7RTS9 669 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
CRLS1-201ENST00000378863 RRP36Q96EU6 259 aaKnown RBP16.62■□□□□ 0.25
CRLS1-201ENST00000378863 CARD6Q9BX69 1037 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 SPATA31A5Q5VU36 1347 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 SPATA31A7Q8IWB4 1347 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 NWD1Q149M9 1564 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 IFNAR1P17181 557 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
CRLS1-201ENST00000378863 IGDCC4Q8TDY8 1250 aa16.62■□□□□ 0.25
CRLS1-201ENST00000378863 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
CRLS1-201ENST00000378863 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 LTN1O94822 1766 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 MMP10P09238 476 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 TBC1D7Q9P0N9 293 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
CRLS1-201ENST00000378863 CCDC102AQ96A19 550 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
CRLS1-201ENST00000378863 MMRN2Q9H8L6 949 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 FMNL1O95466 1100 aaPredicted RBP16.61■□□□□ 0.25
CRLS1-201ENST00000378863 SNAP25P60880 206 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
CRLS1-201ENST00000378863 IQUBQ8NA54 791 aa16.61■□□□□ 0.25
CRLS1-201ENST00000378863 FMN2Q9NZ56 1722 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 MMP1P03956 469 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 SCG2P13521 617 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 XDHP47989 1333 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 TERF1P54274 439 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 MCM6Q14566 821 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 KRBA2Q6ZNG9 492 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 STAG2Q8N3U4 1231 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 RBM28Q9NW13 759 aaKnown RBP16.6■□□□□ 0.25
CRLS1-201ENST00000378863 CALML3P27482 149 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 COA7Q96BR5 231 aa16.6■□□□□ 0.25
CRLS1-201ENST00000378863 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.254e-7■■□□□ 12.7
CRLS1-201ENST00000378863 GNAQP50148 359 aa16.59■□□□□ 0.25
CRLS1-201ENST00000378863 ARID5AQ03989 594 aa16.59■□□□□ 0.25
CRLS1-201ENST00000378863 KANK3Q6NY19 840 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms