RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 NUP98P52948 1817 aa18.9■□□□□ 0.62
PCDHA1-201ENST00000378133 NRAPQ86VF7 1730 aa18.9■□□□□ 0.62
PCDHA1-201ENST00000378133 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 KARSQ15046 597 aaKnown RBP18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 SUSD4Q5VX71 490 aa18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 TC2NQ8N9U0 490 aa18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 HOOK1Q9UJC3 728 aaKnown RBP18.89■□□□□ 0.62
PCDHA1-201ENST00000378133 ERICH2A1L162 156 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 MAP2K7O14733 419 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 ACTN2P35609 894 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 FMR1Q06787 632 aaKnown RBP eCLIP18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 OXER1Q8TDS5 423 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 STAG1Q8WVM7 1258 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 ITGB4P16144 1822 aa18.89■□□□□ 0.61
PCDHA1-201ENST00000378133 SPECC1LQ69YQ0 1117 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 DESI2Q9BSY9 194 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 NFE2L3Q9Y4A8 694 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 MCM6Q14566 821 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 USP49Q70CQ1 688 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 TRMT44Q8IYL2 757 aaKnown RBP18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 CHD4Q14839 1912 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 LRP6O75581 1613 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 BCL9O00512 1426 aa18.88■□□□□ 0.61
PCDHA1-201ENST00000378133 DEXIO95424 95 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 SRLQ86TD4 932 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 FANCBQ8NB91 859 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 CABP5Q9NP86 173 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 LRP2BPQ9P2M1 347 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 CHMP4BP1P59074 171 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 LEKR1Q6ZMV7 388 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 ELOA2Q8IYF1 753 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 PDE11AQ9HCR9 933 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 VPS18Q9P253 973 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 IQSEC3Q9UPP2 1182 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 RRP15Q9Y3B9 282 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 GNAT2P19087 354 aa18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 SARSP49591 514 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 IRX2Q9BZI1 471 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-201ENST00000378133 ANKRD36CQ5JPF3 1778 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 MINDY4BA8MYZ0 360 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 SMIM22K7EJ46 135 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 SRGAP1Q7Z6B7 1085 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 ZNF654Q8IZM8 581 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 EFCC1Q9HA90 598 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 CCDC196A0A1B0GTZ2 297 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 NT5DC1Q5TFE4 455 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 TMTC2Q8N394 836 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 IQUBQ8NA54 791 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 MLKLQ8NB16 471 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 CSRNP2Q9H175 543 aa18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 SRPRBQ9Y5M8 271 aaKnown RBP18.86■□□□□ 0.61
PCDHA1-201ENST00000378133 MORC3Q14149 939 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 PNPLA7Q6ZV29 1317 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 HDXQ7Z353 690 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 HNRNPLLQ8WVV9 542 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 MED15Q96RN5 788 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 WNK3Q9BYP7 1800 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 MRPL44Q9H9J2 332 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 SAMSN1Q9NSI8 373 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 PUF60Q9UHX1 559 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 NID2Q14112 1375 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 ZNF18P17022 549 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 BEND6Q5SZJ8 279 aaPredicted RBP18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 ENOX1Q8TC92 643 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 UBAC1Q9BSL1 405 aa18.85■□□□□ 0.61
PCDHA1-201ENST00000378133 SLIT2O94813 1529 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 CCDC175P0C221 793 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 PPARAQ07869 468 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 ZNF579Q8NAF0 562 aaKnown RBP18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 LZTFL1Q9NQ48 299 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 CYP7A1P22680 504 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 MTF1Q14872 753 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 ADGRA1Q86SQ6 560 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 ANKZF1Q9H8Y5 726 aa18.84■□□□□ 0.61
PCDHA1-201ENST00000378133 hCG_1642624A0A1W2PR95 340 aa18.83■□□□□ 0.61
PCDHA1-201ENST00000378133 FAM205CA6NFA0 338 aa18.83■□□□□ 0.61
PCDHA1-201ENST00000378133 IVLP07476 585 aa18.83■□□□□ 0.61
PCDHA1-201ENST00000378133 RNF41Q9H4P4 317 aaPredicted RBP18.83■□□□□ 0.61
PCDHA1-201ENST00000378133 ABCF2Q9UG63 623 aa18.83■□□□□ 0.61
PCDHA1-201ENST00000378133 DACH1Q9UI36 760 aa18.83■□□□□ 0.61
PCDHA1-201ENST00000378133 A0A0G2JS52 829 aa18.83■□□□□ 0.6
PCDHA1-201ENST00000378133 CEP112Q8N8E3 955 aa18.83■□□□□ 0.6
PCDHA1-201ENST00000378133 SHISA4Q96DD7 197 aa18.83■□□□□ 0.6
PCDHA1-201ENST00000378133 VPS54Q9P1Q0 977 aa18.83■□□□□ 0.6
PCDHA1-201ENST00000378133 CEP131Q9UPN4 1083 aa18.83■□□□□ 0.6
PCDHA1-201ENST00000378133 EXOC5O00471 708 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 ERLIN1O75477 346 aa18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
PCDHA1-201ENST00000378133 IGHMBP2P38935 993 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms