RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CEP131Q9UPN4 1083 aa12.5□□□□□ -0.41
BEST1-201ENST00000378043 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.5□□□□□ -0.41
BEST1-201ENST00000378043 COL5A3P25940 1745 aaPredicted RBP12.49□□□□□ -0.41
BEST1-201ENST00000378043 PHLPP2Q6ZVD8 1323 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 TRIM75PA6NK02 468 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 TNFRSF25Q93038 417 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 ZNF446Q9NWS9 450 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 KDM4FA0A1W2PPD8 638 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 CASP1P29466 404 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
BEST1-201ENST00000378043 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
BEST1-201ENST00000378043 CTR9Q6PD62 1173 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 APTXQ7Z2E3 356 aaKnown RBP12.49□□□□□ -0.41
BEST1-201ENST00000378043 SH3RF1Q7Z6J0 888 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 DHX58Q96C10 678 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
BEST1-201ENST00000378043 BSDC1Q9NW68 430 aaPredicted RBP12.49□□□□□ -0.41
BEST1-201ENST00000378043 FAM53CQ9NYF3 392 aa12.49□□□□□ -0.41
BEST1-201ENST00000378043 NRAPQ86VF7 1730 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 ARHGAP6O43182 974 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 KCNQ2O43526 872 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 KLRK1P26718 216 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 KRT2P35908 639 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 PLCD1P51178 756 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 ADKP55263 362 aaKnown RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 NR1I3Q14994 352 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 GNL3LQ9NVN8 582 aaKnown RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 PPP2R2CQ9Y2T4 447 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 CCP110O43303 1012 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 CATIPQ7Z7H3 387 aa12.48□□□□□ -0.41
BEST1-201ENST00000378043 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 SYMPKQ92797 1274 aaKnown RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 BAG1Q99933 345 aaPredicted RBP12.48□□□□□ -0.41
BEST1-201ENST00000378043 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 USP17L21D6R901 530 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 NMT2O60551 498 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 SLFN14P0C7P3 912 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
BEST1-201ENST00000378043 ERCC5P28715 1186 aaPredicted RBP12.47□□□□□ -0.41
BEST1-201ENST00000378043 AFMP43652 599 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 NOL10Q9BSC4 688 aaKnown RBP12.47□□□□□ -0.41
BEST1-201ENST00000378043 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
BEST1-201ENST00000378043 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 ADAMTS3O15072 1205 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 STX10O60499 249 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 VEGFAP15692 232 aaPredicted RBP12.47□□□□□ -0.41
BEST1-201ENST00000378043 XBP1P17861 261 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 CUL4BQ13620 913 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 SRBD1Q8N5C6 995 aaKnown RBP12.47□□□□□ -0.41
BEST1-201ENST00000378043 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
BEST1-201ENST00000378043 CNTNAP5Q8WYK1 1306 aa12.47□□□□□ -0.41
BEST1-201ENST00000378043 A0A1B0GTH6 734 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 TEX33O43247 280 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 CAVIN4Q5BKX8 364 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 SMIM5Q71RC9 77 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 FBXO33Q7Z6M2 555 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 NSUN4Q96CB9 384 aaKnown RBP12.46□□□□□ -0.41
BEST1-201ENST00000378043 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 IGSF3O75054 1194 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 KCNQ4P56696 695 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 DPYDQ12882 1025 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 ZNF174Q15697 407 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 WDR24Q96S15 920 aa12.46□□□□□ -0.41
BEST1-201ENST00000378043 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
BEST1-201ENST00000378043 THRAP3Q9Y2W1 955 aaKnown RBP12.46□□□□□ -0.41
BEST1-201ENST00000378043 AHDC1Q5TGY3 1603 aaPredicted RBP12.46□□□□□ -0.41
BEST1-201ENST00000378043 LAMB1P07942 1786 aa12.46□□□□□ -0.42
BEST1-201ENST00000378043 ZSCAN12O43309 604 aa12.46□□□□□ -0.42
BEST1-201ENST00000378043 MECOMQ03112 1051 aa12.46□□□□□ -0.42
BEST1-201ENST00000378043 SMYD4Q8IYR2 804 aaPredicted RBP12.46□□□□□ -0.42
BEST1-201ENST00000378043 LINC00116Q8NCU8 138 aa12.46□□□□□ -0.42
BEST1-201ENST00000378043 FERMT2Q96AC1 680 aa12.46□□□□□ -0.42
BEST1-201ENST00000378043 DDAH1O94760 285 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
BEST1-201ENST00000378043 PTGDRQ13258 359 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
BEST1-201ENST00000378043 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
BEST1-201ENST00000378043 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 PPP1R3GB7ZBB8 358 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 ORC4O43929 436 aa12.45□□□□□ -0.42
BEST1-201ENST00000378043 URI1O94763 535 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms