RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 BIRC3Q13489 604 aa22.02■■□□□ 1.11
PCDH8-202ENST00000377942 KIFAP3Q92845 792 aa22.02■■□□□ 1.11
PCDH8-202ENST00000377942 NUP58Q9BVL2 599 aa22.02■■□□□ 1.11
PCDH8-202ENST00000377942 PALD1Q9ULE6 856 aa22.02■■□□□ 1.11
PCDH8-202ENST00000377942 RGS12O14924 1447 aa22.01■■□□□ 1.11
PCDH8-202ENST00000377942 ZSWIM4Q9H7M6 989 aa22.01■■□□□ 1.11
PCDH8-202ENST00000377942 TPCN1Q9ULQ1 816 aa22.01■■□□□ 1.11
PCDH8-202ENST00000377942 BMS1Q14692 1282 aaKnown RBP22.01■■□□□ 1.11
PCDH8-202ENST00000377942 GNPTABQ3T906 1256 aa22.01■■□□□ 1.11
PCDH8-202ENST00000377942 PSTPIP2Q9H939 334 aa22.01■■□□□ 1.11
PCDH8-202ENST00000377942 TLR7Q9NYK1 1049 aaKnown RBP22.01■■□□□ 1.11
PCDH8-202ENST00000377942 GRAPQ13588 217 aa22.01■■□□□ 1.11
PCDH8-202ENST00000377942 GRAPLQ8TC17 118 aaPredicted RBP22.01■■□□□ 1.11
PCDH8-202ENST00000377942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22■■□□□ 1.11
PCDH8-202ENST00000377942 BCCIPQ9P287 314 aaKnown RBP eCLIP22■■□□□ 1.11
PCDH8-202ENST00000377942 TCP10L2B9ZVM9 353 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 ADD1P35611 737 aaKnown RBP22■■□□□ 1.11
PCDH8-202ENST00000377942 RAPGEF1Q13905 1077 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 GPR162Q16538 588 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 TMED8Q6PL24 325 aaPredicted RBP22■■□□□ 1.11
PCDH8-202ENST00000377942 MCF2L2Q86YR7 1114 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 DNAJC5Q9H3Z4 198 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 BSDC1Q9NW68 430 aaPredicted RBP22■■□□□ 1.11
PCDH8-202ENST00000377942 SLC5A4Q9NY91 659 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 BIN2Q9UBW5 565 aaPredicted RBP22■■□□□ 1.11
PCDH8-202ENST00000377942 hCG_1642624A0A1W2PR95 340 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 DYNC1I1O14576 645 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 LMAN1P49257 510 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 MAP3K9P80192 1104 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 CTR9Q6PD62 1173 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 ARHGAP27Q6ZUM4 889 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 BAG1Q99933 345 aaPredicted RBP22■■□□□ 1.11
PCDH8-202ENST00000377942 TTLL11Q8NHH1 800 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 AXIN2Q9Y2T1 843 aa22■■□□□ 1.11
PCDH8-202ENST00000377942 NPR1P16066 1061 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 GPATCH4Q5T3I0 446 aaKnown RBP21.99■■□□□ 1.11
PCDH8-202ENST00000377942 SLFN13Q68D06 897 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 IGSF22Q8N9C0 903 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 ABCB5Q2M3G0 1257 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 MAATS1Q7Z4T9 603 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 FBXO11Q86XK2 927 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 LAMC1P11047 1609 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 OVOS2A0A0G2JMS6 1433 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 OVOS2A0A0J9YW53 1432 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 OVOS2Q6IE36 1432 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 DNM2P50570 870 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 ZNF445P59923 1031 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 IKBKGQ9Y6K9 419 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 SULF1Q8IWU6 871 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 CCDC155Q8N6L0 562 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 SMCR8Q8TEV9 937 aaPredicted RBP21.99■■□□□ 1.11
PCDH8-202ENST00000377942 HOMER2Q9NSB8 354 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 NOD1Q9Y239 953 aa21.99■■□□□ 1.11
PCDH8-202ENST00000377942 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 EEF2P13639 858 aaKnown RBP21.98■■□□□ 1.11
PCDH8-202ENST00000377942 ADRA2BP18089 450 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 PDIA3P30101 505 aaKnown RBP21.98■■□□□ 1.11
PCDH8-202ENST00000377942 SUSD4Q5VX71 490 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 GAS7O60861 476 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 FOSP01100 380 aaPredicted RBP21.98■■□□□ 1.11
PCDH8-202ENST00000377942 FAM182BQ5T319 152 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 RGS22Q8NE09 1264 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 DCPSQ96C86 337 aaKnown RBP21.98■■□□□ 1.11
PCDH8-202ENST00000377942 IWS1Q96ST2 819 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 GUCA1BQ9UMX6 200 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 POLR2MP0CAP2 368 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 VPS16Q9H269 839 aa21.98■■□□□ 1.11
PCDH8-202ENST00000377942 TUBBP07437 444 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 FANCCQ00597 558 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 CCDC93Q567U6 631 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 LMBRD1Q9NUN5 540 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 SLU7O95391 586 aaKnown RBP21.97■■□□□ 1.11
PCDH8-202ENST00000377942 OTUD6AQ7L8S5 288 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 NEK8Q86SG6 692 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 NARFQ9UHQ1 456 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 HSF2BPO75031 334 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 SLFN12Q8IYM2 578 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 CCDC77Q9BR77 488 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 ATP2A1O14983 1001 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 ASPRV1Q53RT3 343 aa21.97■■□□□ 1.11
PCDH8-202ENST00000377942 RPAP1Q9BWH6 1393 aaPredicted RBP21.96■■□□□ 1.11
PCDH8-202ENST00000377942 CLCN1P35523 988 aa21.96■■□□□ 1.11
PCDH8-202ENST00000377942 EAPPQ56P03 285 aaPredicted RBP21.96■■□□□ 1.11
PCDH8-202ENST00000377942 MYCT1Q8N699 235 aa21.96■■□□□ 1.11
PCDH8-202ENST00000377942 DDX39AO00148 427 aaKnown RBP21.96■■□□□ 1.11
PCDH8-202ENST00000377942 LRRC47Q8N1G4 583 aaKnown RBP21.96■■□□□ 1.11
PCDH8-202ENST00000377942 DHX36Q9H2U1 1008 aaKnown RBP21.96■■□□□ 1.11
PCDH8-202ENST00000377942 MTMR6Q9Y217 621 aa21.96■■□□□ 1.11
PCDH8-202ENST00000377942 IQCDQ96DY2 449 aa21.96■■□□□ 1.11
PCDH8-202ENST00000377942 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.96■■□□□ 1.11
PCDH8-202ENST00000377942 STX10O60499 249 aa21.96■■□□□ 1.11
PCDH8-202ENST00000377942 ARFGAP3Q9NP61 516 aa21.96■■□□□ 1.11
PCDH8-202ENST00000377942 PNPLA6Q8IY17 1366 aa21.95■■□□□ 1.11
PCDH8-202ENST00000377942 CYP21A2P08686 494 aa21.95■■□□□ 1.1
PCDH8-202ENST00000377942 MTX1Q13505 466 aa21.95■■□□□ 1.1
PCDH8-202ENST00000377942 RNF26Q9BY78 433 aaPredicted RBP21.95■■□□□ 1.1
PCDH8-202ENST00000377942 HARSP12081 509 aaKnown RBP21.95■■□□□ 1.1
PCDH8-202ENST00000377942 NFE2L3Q9Y4A8 694 aa21.95■■□□□ 1.1
PCDH8-202ENST00000377942 TRPC3Q13507 836 aa21.95■■□□□ 1.1
PCDH8-202ENST00000377942 CCDC84Q86UT8 332 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms