RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 EBAG9O00559 213 aa20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 NR1I3Q14994 352 aa20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 METTL24Q5JXM2 366 aa20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 FBXW10Q5XX13 1052 aa20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 CPLX2Q6PUV4 134 aaKnown RBP20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 NAA15Q9BXJ9 866 aaKnown RBP20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 LY9Q9HBG7 655 aa20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 SLC12A7Q9Y666 1083 aa20.32■□□□□ 0.84
TUBGCP3-202ENST00000375669 CPDO75976 1380 aa20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 SMIM22K7EJ46 135 aa20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 NAPGQ99747 312 aaPredicted RBP20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 HPCAL4Q9UM19 191 aa20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 RNF225M0QZC1 329 aaPredicted RBP20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 SSRP1Q08945 709 aaKnown RBP20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 RASGRP2Q7LDG7 609 aa20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 FBXO2Q9UK22 296 aaPredicted RBP20.31■□□□□ 0.84
TUBGCP3-202ENST00000375669 OVOS2A0A0G2JMS6 1433 aa20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 FXR1P51114 621 aaKnown RBP eCLIP20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 FAM237AA0A1B0GTK4 181 aa20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 CDKL5O76039 1030 aa20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 ZFYP08048 801 aaPredicted RBP20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 NCAPH2Q6IBW4 605 aa20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 NUTM2AQ8IVF1 878 aaPredicted RBP20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 TRIM10Q9UDY6 481 aa20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 MAPK8IP1Q9UQF2 711 aa20.3■□□□□ 0.84
TUBGCP3-202ENST00000375669 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 PRKAB2O43741 272 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 MORC3Q14149 939 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 LDHAL6AQ6ZMR3 332 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 RPAINQ86UA6 219 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 PPFIBP1Q86W92 1011 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 ENOX1Q8TC92 643 aaKnown RBP20.29■□□□□ 0.84
TUBGCP3-202ENST00000375669 WNT7AO00755 349 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 ENC1O14682 589 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 ADD2P35612 726 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 RIN2Q8WYP3 895 aaPredicted RBP20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 PHKA1P46020 1223 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 IRAK1P51617 712 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 IFIT5Q13325 482 aaKnown RBP20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 EARS2Q5JPH6 523 aaKnown RBP20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 KAT14Q9H8E8 782 aa20.28■□□□□ 0.84
TUBGCP3-202ENST00000375669 PRDM1O75626 825 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 ZMYND10O75800 440 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 STIM1Q13586 685 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 MAP9Q49MG5 647 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 AIDAQ96BJ3 306 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 EEF2KMTQ96G04 330 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 BLZF1Q9H2G9 400 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 HOOK1Q9UJC3 728 aaKnown RBP20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 TTF2Q9UNY4 1162 aaKnown RBP20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 SIPA1L3O60292 1781 aaPredicted RBP20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 CIAO1O76071 339 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 MMP1P03956 469 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 SARSP49591 514 aaKnown RBP20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 MLKLQ8NB16 471 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 FAM76AQ8TAV0 307 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 GREM2Q9H772 168 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 ARMT1Q9H993 441 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 MYO6Q9UM54 1294 aa20.27■□□□□ 0.84
TUBGCP3-202ENST00000375669 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 ACTN4O43707 911 aaKnown RBP20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 PTPREP23469 700 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 INPP5BP32019 993 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 DPYDQ12882 1025 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 APTXQ7Z2E3 356 aaKnown RBP20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 CNPY4Q8N129 248 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 VPS16Q9H269 839 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 GGCXP38435 758 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 COG1Q8WTW3 980 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 EPB41L4AQ9HCS5 686 aaPredicted RBP20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 CNNM1Q9NRU3 951 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 GYPCP04921 128 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 MCM3P25205 808 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 USP14P54578 494 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 ANKLE2Q86XL3 938 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 SLF1Q9BQI6 1058 aa20.26■□□□□ 0.83
TUBGCP3-202ENST00000375669 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.26■□□□□ 0.836e-7■■■□□ 14.6
TUBGCP3-202ENST00000375669 SAFBQ15424 915 aaKnown RBP eCLIP20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 ARFGEF2Q9Y6D5 1785 aa20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 SRGAP2O75044 1071 aa20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 PDE6AP16499 860 aa20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 AMPD2Q01433 879 aa20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 VPS54Q9P1Q0 977 aa20.25■□□□□ 0.83
TUBGCP3-202ENST00000375669 ITGA6P23229 1130 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 PLCD1P51178 756 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 SETQ01105 290 aaPredicted RBP20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 BCAS4Q8TDM0 211 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 SHISA4Q96DD7 197 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 NAPBQ9H115 298 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 RABEP2Q9H5N1 569 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 MYO1AQ9UBC5 1043 aa20.24■□□□□ 0.83
TUBGCP3-202ENST00000375669 MBD4O95243 580 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms