RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 MYL10Q9BUA6 226 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 ATP8A2Q9NTI2 1148 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 PODXL2Q9NZ53 605 aa14.02□□□□□ -0.16
UBR4-203ENST00000375225 ARPP21Q9UBL0 812 aaPredicted RBP14.02□□□□□ -0.16
UBR4-203ENST00000375225 DUOX1Q9NRD9 1551 aa14.02□□□□□ -0.17
UBR4-203ENST00000375225 LTBP1Q14766 1721 aa14.02□□□□□ -0.17
UBR4-203ENST00000375225 PRPF3O43395 683 aaKnown RBP14.01□□□□□ -0.17
UBR4-203ENST00000375225 UFL1O94874 794 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 SKILP12757 684 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 TNNT1P13805 278 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 KRT2P35908 639 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 PDE4BQ07343 736 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 SYCP1Q15431 976 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 C15orf52Q6ZUT6 534 aaKnown RBP14.01□□□□□ -0.17
UBR4-203ENST00000375225 CERS3Q8IU89 383 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 C17orf53Q8N3J3 647 aaPredicted RBP14.01□□□□□ -0.17
UBR4-203ENST00000375225 CCDC112Q8NEF3 446 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.171e-10■□□□□ 8.5
UBR4-203ENST00000375225 RIOK1Q9BRS2 568 aaKnown RBP14.01□□□□□ -0.17
UBR4-203ENST00000375225 SENP2Q9HC62 589 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 GJB4Q9NTQ9 266 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 NRBP1Q9UHY1 535 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 CCDC88AQ3V6T2 1871 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 MROH7-TTC4A0A0A0MT08 1334 aa14.01□□□□□ -0.17
UBR4-203ENST00000375225 ORC4O43929 436 aa14□□□□□ -0.17
UBR4-203ENST00000375225 FGRP09769 529 aa14□□□□□ -0.17
UBR4-203ENST00000375225 SFPQP23246 707 aaKnown RBP eCLIP14□□□□□ -0.17
UBR4-203ENST00000375225 PTPREP23469 700 aa14□□□□□ -0.17
UBR4-203ENST00000375225 SEC23AQ15436 765 aa14□□□□□ -0.17
UBR4-203ENST00000375225 FILIP1Q7Z7B0 1213 aa14□□□□□ -0.17
UBR4-203ENST00000375225 NBPF11Q86T75 865 aa14□□□□□ -0.17
UBR4-203ENST00000375225 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
UBR4-203ENST00000375225 SRPRBQ9Y5M8 271 aaKnown RBP14□□□□□ -0.17
UBR4-203ENST00000375225 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
UBR4-203ENST00000375225 TRIM75PA6NK02 468 aa14□□□□□ -0.17
UBR4-203ENST00000375225 BTBD18B2RXH4 712 aa14□□□□□ -0.17
UBR4-203ENST00000375225 KLRK1P26718 216 aa14□□□□□ -0.17
UBR4-203ENST00000375225 KIF5BP33176 963 aa14□□□□□ -0.17
UBR4-203ENST00000375225 GSTO1P78417 241 aa14□□□□□ -0.17
UBR4-203ENST00000375225 LRMPQ12912 555 aa14□□□□□ -0.17
UBR4-203ENST00000375225 PTPN14Q15678 1187 aa14□□□□□ -0.17
UBR4-203ENST00000375225 CCDC144BQ3MJ40 725 aa14□□□□□ -0.17
UBR4-203ENST00000375225 MLKLQ8NB16 471 aa14□□□□□ -0.17
UBR4-203ENST00000375225 FBXW7Q969H0 707 aa14□□□□□ -0.17
UBR4-203ENST00000375225 CNKSR1Q969H4 720 aa14□□□□□ -0.17
UBR4-203ENST00000375225 FERMT2Q96AC1 680 aa14□□□□□ -0.17
UBR4-203ENST00000375225 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
UBR4-203ENST00000375225 IQSEC3Q9UPP2 1182 aaPredicted RBP14□□□□□ -0.17
UBR4-203ENST00000375225 LAMB1P07942 1786 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 IRS2Q9Y4H2 1338 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.99□□□□□ -0.17
UBR4-203ENST00000375225 BIN1O00499 593 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 SERPINC1P01008 464 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 RBM10P98175 930 aaKnown RBP13.99□□□□□ -0.17
UBR4-203ENST00000375225 SBK1Q52WX2 424 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 CEP135Q66GS9 1140 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 SDR42E1Q8WUS8 393 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 IFNKQ9P0W0 207 aa13.99□□□□□ -0.17
UBR4-203ENST00000375225 COL1A1P02452 1464 aaPredicted RBP13.98□□□□□ -0.17
UBR4-203ENST00000375225 WTIPA6NIX2 430 aaPredicted RBP13.98□□□□□ -0.17
UBR4-203ENST00000375225 C6orf229H3BNL8 230 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 FANCCQ00597 558 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 POSTNQ15063 836 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 TMC6Q7Z403 805 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 TBC1D16Q8TBP0 767 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 C16orf45Q96MC5 204 aaPredicted RBP13.98□□□□□ -0.17
UBR4-203ENST00000375225 XPO4Q9C0E2 1151 aaKnown RBP13.98□□□□□ -0.17
UBR4-203ENST00000375225 AATFQ9NY61 560 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBR4-203ENST00000375225 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 KIF13BQ9NQT8 1826 aa13.98□□□□□ -0.17
UBR4-203ENST00000375225 KIAA1551Q9HCM1 1747 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 POLD1P28340 1107 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 TRAPPC10P48553 1259 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 UBASH3AP57075 661 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 DPP8Q6V1X1 898 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 FAM177A1Q8N128 213 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 NSUN4Q96CB9 384 aaKnown RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 ZNF287Q9HBT7 754 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 FBXO2Q9UK22 296 aaPredicted RBP13.97□□□□□ -0.17
UBR4-203ENST00000375225 KCNJ14Q9UNX9 436 aa13.97□□□□□ -0.17
UBR4-203ENST00000375225 LDHCP07864 332 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 CALML3P27482 149 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 GNAQP50148 359 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 PNOCQ13519 176 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 LONRF3Q496Y0 759 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 NT5DC1Q5TFE4 455 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 CTR9Q6PD62 1173 aa13.96□□□□□ -0.17
UBR4-203ENST00000375225 TXNRD3Q86VQ6 643 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms