RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 IRS2Q9Y4H2 1338 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 MECOMQ03112 1051 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 C11orf57Q6ZUT1 292 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-202ENST00000374487 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-202ENST00000374487 NSUN4Q96CB9 384 aaKnown RBP13.95□□□□□ -0.18
HMGCL-202ENST00000374487 EYA3Q99504 573 aa13.95□□□□□ -0.18
HMGCL-202ENST00000374487 R3HCC1Q9Y3T6 440 aaKnown RBP13.95□□□□□ -0.18
HMGCL-202ENST00000374487 TNKSO95271 1327 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 UBE2Q2LH0YL09 131 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 ZNF202O95125 648 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 VEGFAP15692 232 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-202ENST00000374487 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-202ENST00000374487 RCAN1P53805 252 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 DNTTIP2Q5QJE6 756 aaKnown RBP13.94□□□□□ -0.18
HMGCL-202ENST00000374487 CIAPIN1Q6FI81 312 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 CEP57L1Q8IYX8 460 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 GPC2Q8N158 579 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 PIBF1Q8WXW3 757 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 FBXW7Q969H0 707 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 NID2Q14112 1375 aa13.94□□□□□ -0.18
HMGCL-202ENST00000374487 CYP2D7A0A087X1C5 515 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 G3V3G9 751 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 PPP6R2O75170 966 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 DEXIO95424 95 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 GUCY1A2P33402 732 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 ZNF75DP51815 510 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 IQCB1Q15051 598 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 AXDND1Q5T1B0 1012 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 DCAF8Q5TAQ9 597 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 CRACR2BQ8N4Y2 399 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 CRNKL1Q9BZJ0 848 aaKnown RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 KIAA1468Q9P260 1216 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 LEMD3Q9Y2U8 911 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 SCN9AQ15858 1988 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 USP17L21D6R901 530 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 WDHD1O75717 1129 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 MMP1P03956 469 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 PFKFB1P16118 471 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 NOLC1Q14978 699 aaKnown RBP eCLIP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 PPP2R5BQ15173 497 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 PLA2G4DQ86XP0 818 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 NOSTRINQ8IVI9 506 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 VPS33BQ9H267 617 aa13.93□□□□□ -0.18
HMGCL-202ENST00000374487 PDS5AQ29RF7 1337 aaKnown RBP13.93□□□□□ -0.18
HMGCL-202ENST00000374487 A0A087WWV3 80 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 BTBD18B2RXH4 712 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 PRDM1O75626 825 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 EGFRP00533 1210 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 SEC23AQ15436 765 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 EAPPQ56P03 285 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 DIS3L2Q8IYB7 885 aaKnown RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 L3MBTL3Q96JM7 780 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 KCNJ14Q9UNX9 436 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 SMIM22K7EJ46 135 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 TPM2P07951 284 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 PRDX5P30044 214 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 SYKP43405 635 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 SPTY2D1Q68D10 685 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 NBPF11Q86T75 865 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 MAP3K14Q99558 947 aa13.92□□□□□ -0.18
HMGCL-202ENST00000374487 TAF1DQ9H5J8 278 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-202ENST00000374487 WDR90Q96KV7 1748 aa13.91□□□□□ -0.18
HMGCL-202ENST00000374487 XBP1P17861 261 aa13.91□□□□□ -0.18
HMGCL-202ENST00000374487 C1QTNF8P60827 252 aa13.91□□□□□ -0.18
HMGCL-202ENST00000374487 PTPAQ15257 358 aa13.91□□□□□ -0.18
HMGCL-202ENST00000374487 DZIP1Q86YF9 867 aaKnown RBP13.91□□□□□ -0.18
HMGCL-202ENST00000374487 CLIP2Q9UDT6 1046 aa13.91□□□□□ -0.18
HMGCL-202ENST00000374487 ZBTB22O15209 634 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 PTGS1P23219 599 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 EPHX2P34913 555 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 CCDC186Q7Z3E2 898 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 ATP8A2Q9NTI2 1148 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 TERF1P54274 439 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 DHX40Q8IX18 779 aaKnown RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 AOPEPQ8N6M6 819 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 KCNF1Q9H3M0 494 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
HMGCL-202ENST00000374487 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-202ENST00000374487 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms